Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2273g00005 ATGATCAGTGCAAAAAGGATTATTAAAATGGCAAGAAAGTGGCAGCAAATGGCAGCTGGAAACCGCAAGAGAATTTCATACCCAAGACACGAAGTGAGTATGCATTCTTCAGCAGCAAACAAGGGCCACTTCGTTGTTTACAGCATCGATCATAAGCGATTTGTGGTTCCCCTCAAGTATCTTAGCACCAACATCTTCAGGGAGCTTCTCAAATGGTCAGAGGAAGAGTTTGGTTTACCAGCCAATAGACCAATTATGTTACCTTGTGAAAGTGTGTTCTTGGACTATGTAATCTCGTTAGTTCGAGAAAGCATCCCCGAAGATGTGGAGAAGGCTTTGACCACTTTCGTGGCTGCATGTCACAACGAGGCATCATCTTCTAATTATGGTCTTAGGCAAAGCAACGTACAAACAATTATTTATGGATTTTGA 432 0.4213 MISAKRIIKMARKWQQMAAGNRKRISYPRHEVSMHSSAANKGHFVVYSIDHKRFVVPLKYLSTNIFRELLKWSEEEFGLPANRPIMLPCESVFLDYVISLVRESIPEDVEKALTTFVAACHNEASSSNYGLRQSNVQTIIYGF 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2273g00005 143 Pfam Auxin responsive protein 12 100 IPR003676 GO:0009733
Gabi2273g00005 143 PANTHER AUXIN-RESPONSIVE FAMILY PROTEIN 1 121 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2273g00005 Gabi-Chr2273 64887 65510 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2273g00005 3 138 Calmodulin-binding Proteins AT4G34750 26.429 1.17e-08 49.3