Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2264g00001 ATGGAAGACAAAGACGGAGCAGCATCTTCCGATCCTGCAACCACCGCTGAGTTCGCCGGCGAGTCGAGCTGGACACTCGGCGCCGATGACTCGGACGGTGCCTATCTCTTCTCCGGCGACAGGGAGAGAAGCATACTCGGCGACTTCGGCTGGAACATCGAGCCGGACCAACCGAACCGGATCGGCGCCGACGACCGATTGTGGCTACCGGCTCACTCTGCTCTGACCGGTTCGATCGAACCGGCTGAGATTGCTTCGGCTGCGGCATCGTCCAGGTCGAATAACCAATCGATGTCTTCCAGCTCCAGCGAGGATCCGCCGGAGAAACCCACCGTCTCCGACGAGAAACCGCCTGAGATTCCGAGTAAAAGTAAGAAGAAGGGGCAGAAGCGAATACGGCAGCCACGGTTTGCATTTATGACAAAGAGCGAAGTTGATCATCTTGAGGATGGCTACAGATGGCGGAAGTATGGTCAGAAGGCAGTTAAAAATAGTCCGTTCCCTAGGAGCTACTATCGTTGCACAAACAGCAAATGCACGGTGAAAAAAAGGGTTGAACGCTCCTCAGAGGACCCAACTATTGTGATTACTACATATGAAGGCCAACACTGTCACCATACCGTTGGATTCCCTCGAGGGGGTATCATTAGTCATGAAGCTGCCTTTGCGGGACAGTTGGCTCCTACAATGTCTCAGTTCTATTATCCAATTCAATTACCCAGATCAGACAATACTTTTACCAGTATTTCTCAGCCTTGCCAAGCACATGATGAAGCTGGAGGATCCAACACTACAACAATGCCATCTGATACATCTCCACAGCCTCCCACGGATGAGGGACTACTTGGAGATATTGTTCCACCGGGAATGCGCAACAGCTGA 882 0.5238 MEDKDGAASSDPATTAEFAGESSWTLGADDSDGAYLFSGDRERSILGDFGWNIEPDQPNRIGADDRLWLPAHSALTGSIEPAEIASAAASSRSNNQSMSSSSSEDPPEKPTVSDEKPPEIPSKSKKKGQKRIRQPRFAFMTKSEVDHLEDGYRWRKYGQKAVKNSPFPRSYYRCTNSKCTVKKRVERSSEDPTIVITTYEGQHCHHTVGFPRGGIISHEAAFAGQLAPTMSQFYYPIQLPRSDNTFTSISQPCQAHDEAGGSNTTTMPSDTSPQPPTDEGLLGDIVPPGMRNS 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2264g00001 293 SUPERFAMILY WRKY DNA-binding domain 140 206 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi2264g00001 293 MobiDBLite consensus disorder prediction 87 107 - -
Gabi2264g00001 293 Gene3D WRKY domain 135 201 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi2264g00001 293 ProSiteProfiles WRKY domain profile. 143 208 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi2264g00001 293 MobiDBLite consensus disorder prediction 251 293 - -
Gabi2264g00001 293 MobiDBLite consensus disorder prediction 251 276 - -
Gabi2264g00001 293 Pfam WRKY DNA -binding domain 149 205 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi2264g00001 293 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 55 242 IPR044810 GO:0003700
Gabi2264g00001 293 MobiDBLite consensus disorder prediction 80 136 - -
Gabi2264g00001 293 MobiDBLite consensus disorder prediction 1 36 - -
Gabi2264g00001 293 MobiDBLite consensus disorder prediction 108 125 - -
Gabi2264g00001 293 FunFam WRKY transcription factor 57 134 208 - -
Gabi2264g00001 293 SMART WRKY_cls 148 207 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2264g00001 Gabi-Chr2264 9615 16831 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2264g00001 21 292 WRKY Transcription Factor Family AT1G69310 51.351 5.13e-78 237
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gabi2264g00001 WRKY 1.8e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2264g00001 - - gmx:100127427 443.351