Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2259g00009 ATGGAGAATCAATCTTCAAATGGCAGAATAGCAATGGAAGAGCAGCTAATCAGAGGGCGTGACATGGCAAACCAGTTACTTGAAGTAATTGCAAACGAGGAAGGGTCAAAGTCAGTATTACCAATTGCTGAAGATCTTGTTCGGAATGTACTGAGATCATTCACAAATACCCTTTTGTTCTTGAACACCAATAATGATCACTCCGATGAGGTGGTGGTGCCCATTCCTATCAGAGATATCTCTTCCTCCACAAACTGCACAAAGCCAGAGGGTCTGGATGAAACTTGCAAGAATATCAAAATTCTCAACACCAAAAATCGAAGAGCGTGCTACAAGAGAAAATCAGTTGCACCAACTAGGGAGACGGAAAGCTCAATTCTGATTGAAGATGGCCATGCATGGAGAAAGTATGGACAAAAAATGACAATGAATGCCAAATATCTCAGGAGCTACTACAGGTGTACTTACAAGAATGAACAGAAATGCCAAGCAATCAAACAAGTGCAGAGAATTCAAGAGAACCCTCCATTGTACCGGACAACATATTATGGTCATCACACTTGTGAATGCTCTCTTAACCATGAGATAATGTTGGAATCTGCTTCATCTTCTGCCTCTTCTGGATTACTATGCTTCAATAGTACCCTCCCCAAAAGCAAAGAACAACCGGTTTTTTCATCAACAAAACAGAAGTCTGCGGAAGTGATTGCAGATGACCAAATTAATCACAACCAATTGTCCTCACCAGATTACCTCCACCTTTTATGTGACTATGAACTTGATTTCAATTATACGAGGCATGTCACGATGCTATCATCCACCGATTCTGTTGAATTTCACAATGTTTAA 849 0.4052 MENQSSNGRIAMEEQLIRGRDMANQLLEVIANEEGSKSVLPIAEDLVRNVLRSFTNTLLFLNTNNDHSDEVVVPIPIRDISSSTNCTKPEGLDETCKNIKILNTKNRRACYKRKSVAPTRETESSILIEDGHAWRKYGQKMTMNAKYLRSYYRCTYKNEQKCQAIKQVQRIQENPPLYRTTYYGHHTCECSLNHEIMLESASSSASSGLLCFNSTLPKSKEQPVFSSTKQKSAEVIADDQINHNQLSSPDYLHLLCDYELDFNYTRHVTMLSSTDSVEFHNV 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2259g00009 282 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 16 213 IPR044810 GO:0003700
Gabi2259g00009 282 SMART WRKY_cls 128 190 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi2259g00009 282 Gene3D WRKY domain 112 190 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi2259g00009 282 Pfam WRKY DNA -binding domain 129 189 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi2259g00009 282 ProSiteProfiles WRKY domain profile. 123 191 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi2259g00009 282 SUPERFAMILY WRKY DNA-binding domain 126 189 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2259g00009 Gabi-Chr2259 264353 266471 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2259g00009 9 200 WRKY Transcription Factor Family AT3G56400 35.047 2.77e-32 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gabi2259g00009 WRKY 2e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2259g00009 - - gmx:102663281 325.479