Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2259g00008 ATGGAGAATCAGCTTTCAAATGGAAGAAAGGAAATGGAACAAGAGTTACTCAGAGGGCGTGACATAGCAAATCAGTTACTTGAAGTACTTGTTCATAAATCGAATACTCACCATGAAGATGTAAGAGGGTCAATGTTACCATTTGCTGAAGATCTTGTGCGCAAGGTACTGAGATCATTCACAAACACCCTTTTCATCTTGAACACCAGTAATGATGTCTCCAATGAGGTGGTTGTTCCTATCACTGTCAGAGATTTCTCTTCTTCCGCTAATTGCCAAAAGCCTGAGGATACAGATGAGACTCGCGAGAGTTTCTTCAACCCTAAAAGTAGAAGAGGGTGCTACAAGAGAAAGTCAACTGCACCAACTTGGGAGAAGGACAGCTCAAATCTGATTGAAGATGGCTATGCATGGAGAAAGTATGGACAAAAAATGACAATGAATGCCAAATACCTTAGGAGCTACTTCAGATGCACTCACAAGAATGAACAAGGTTGTCCAGCAATCAAACAAGTGCAGAGAATTCAAGACTACCCTCCATTATATAGGACAACATATTATGGGCATCACAAATGCAAAAGCTCTATAAATTCAGAGATGATTTTGGAACCTAATTCTTCTTCTGGCTCTTCTATATTCCTTAGCTTCAATAACAGCCTTTCAAGCAAAGAAGAATACCCTTTTTCATCATCACTTTTTGCATCCACAAAACATGAGCCTATGGAAGTGATTCCCAATGACCATGTTGCTCACAACCAATTGTCCTCATCAGATTACCTCATGCCATGTGACTATGAACTTGATTTTAGTTATTCAAGTCATGTTACTATGCTACCAGATACCGAATCTGTTCAATTTGATCAAAACGTTTATGGGTGCAGTTTGGATTTTGATGGCTAG 900 0.3944 MENQLSNGRKEMEQELLRGRDIANQLLEVLVHKSNTHHEDVRGSMLPFAEDLVRKVLRSFTNTLFILNTSNDVSNEVVVPITVRDFSSSANCQKPEDTDETRESFFNPKSRRGCYKRKSTAPTWEKDSSNLIEDGYAWRKYGQKMTMNAKYLRSYFRCTHKNEQGCPAIKQVQRIQDYPPLYRTTYYGHHKCKSSINSEMILEPNSSSGSSIFLSFNNSLSSKEEYPFSSSLFASTKHEPMEVIPNDHVAHNQLSSSDYLMPCDYELDFSYSSHVTMLPDTESVQFDQNVYGCSLDFDG 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2259g00008 299 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 13 209 IPR044810 GO:0003700
Gabi2259g00008 299 SUPERFAMILY WRKY DNA-binding domain 128 193 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi2259g00008 299 ProSiteProfiles WRKY domain profile. 127 195 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi2259g00008 299 Gene3D WRKY domain 117 195 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi2259g00008 299 Pfam WRKY DNA -binding domain 133 193 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi2259g00008 299 SMART WRKY_cls 132 194 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2259g00008 Gabi-Chr2259 179597 181422 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2259g00008 15 194 WRKY Transcription Factor Family AT3G56400 39.891 2.41e-37 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gabi2259g00008 WRKY 3.8e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2259g00008 - - gmx:102663141 384.415