Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2255g00015 ATGATGTGGGAATGGGAAGATGACTTTGAAGATCATAACATCCCCAAACCCGACCAACCCAACCCTGATTCCTATCTCAATTTCGATTTCTTCTCTTCTCTCTCCACACCCAAGGATTACTATAAGATATTGGAAGTGGATTATGATGCCACCGATGATACTATTCGCTCCAATTACATTCGTTTAGCTCTGAAATGGCACCCTGACAAGCAGAAAGACCAAGATGCAGCAACTTCACGCTTTCAAGATATAAACGAGGCTTATCAGGTTTTGAGTGATCCAGTCAAAAGGAAAGAATATGACAAAAATGGGATGCATTACGTATACGATTACAATATCATTGATTATCTTAACCGTTACAAGGGCCTTATATTGACGTGCAATGGCCTCGGCATAAAGCATTCAATATGGTAA 414 0.401 MMWEWEDDFEDHNIPKPDQPNPDSYLNFDFFSSLSTPKDYYKILEVDYDATDDTIRSNYIRLALKWHPDKQKDQDAATSRFQDINEAYQVLSDPVKRKEYDKNGMHYVYDYNIIDYLNRYKGLILTCNGLGIKHSIW 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2255g00015 137 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 1 137 - -
Gabi2255g00015 137 Pfam DnaJ domain 39 101 IPR001623 -
Gabi2255g00015 137 ProSitePatterns Nt-dnaJ domain signature. 81 100 IPR018253 -
Gabi2255g00015 137 SMART dnaj_3 38 96 IPR001623 -
Gabi2255g00015 137 SUPERFAMILY Chaperone J-domain 35 123 IPR036869 -
Gabi2255g00015 137 Gene3D DnaJ domain 31 116 IPR036869 -
Gabi2255g00015 137 FunFam Chaperone protein DNAj, putative 31 118 - -
Gabi2255g00015 137 CDD DnaJ 39 93 IPR001623 -
Gabi2255g00015 137 ProSiteProfiles dnaJ domain profile. 39 104 IPR001623 -
Gabi2255g00015 137 PRINTS DnaJ domain signature 96 115 IPR001623 -
Gabi2255g00015 137 PRINTS DnaJ domain signature 59 74 IPR001623 -
Gabi2255g00015 137 PRINTS DnaJ domain signature 76 96 IPR001623 -
Gabi2255g00015 137 PRINTS DnaJ domain signature 41 59 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2255g00015 Gabi-Chr2255 223398 227130 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2255g00015 32 101 C2H2 Transcription Factor Family AT1G74250 42.667 1.77e-11 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2255g00015 - - var:108338470 248.825