Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2255g00014 ATGGCACCCAGTTTTGATTGTGTCTCAAGCCTCCTCTGTACAGAAGACGACAGCATTTTTGACGAAAACGATAATGGGGTTTCGTTGGAGATGTTGGAGGATACATGGCATCCTAGATATCGTCGAAACCATAATCAAAGCGAGTACTTTGGTGACCCAAATGGGTGGTTGCCATTGCAGAGTGAAGAGTGTTTGGCTCTAATGTTGGAAAAGGAATGCCATCACTTGCCTGGTGGTGATTACTTGAAAAGGCTGCGAAGTGGGGATTTGGATTTTGGGGCCAGAAAGGAGGCCATTGATTGGATTGAAAAGGTGCGAAAGCATTTTGGCTTTGGACCTCTCTGTGCATATCTATCCATAAACTACTTGGATCGCTTCCTTTCTGCATATGAATTACCTAAGCAAAGAGCTTGGACCATGCAATTGTTGGCTGTGGCATGCTTATCTCTGGCAGCCAAATTAGAGGAGACTGAAGTTCCTCTATCTCTTGATTTGCAGGTGGGTGAATCTAAGTTTGTATTTGAAGCTAAAACAATAAAGAGAATGGAGCTTCTTATACTGAGCACATTGAGGTGGAGAATGCAAGCAATTACCCCTTTCTCTTTCATTGACTATTTCCTTTGCAAGATCAATGATGATCAAAGTCCAAAAGGAGCTTCAATTTTGCGATCCGTCCAACTTATACTGAGTACTGTTAGAGGAATTGACTTCTTAGAGTTCAGACCATCAGAGATTGGAGCAGCAGTGGCATTATCTGTGGTGGGGGAAACCCAAACGGTTCATACTGAGAAAGCAATTTCTGTTCTGATTCAGCACATAGAAAAGGAGAGGGTCTTGAAGTGTGTTAAAATGATCCAGGAGCTCTCATCAAACAGTGGTTGTGCTAAGGATACTAGTGCTTCAGTTTCTGTCCCTTGTGTGCCTCGAAGCCCAATAGGGGTGTTGGATGCTGTATGCTTCAGCTACAAAAGTGATGACTCAAATGCTGGATCATGTGCAAATTCTTCACATAATAGCCCAGATGCTAAAAGGAGGAAGCTAAACAAAACCTGTGGAGTATAG 1062 0.4303 MAPSFDCVSSLLCTEDDSIFDENDNGVSLEMLEDTWHPRYRRNHNQSEYFGDPNGWLPLQSEECLALMLEKECHHLPGGDYLKRLRSGDLDFGARKEAIDWIEKVRKHFGFGPLCAYLSINYLDRFLSAYELPKQRAWTMQLLAVACLSLAAKLEETEVPLSLDLQVGESKFVFEAKTIKRMELLILSTLRWRMQAITPFSFIDYFLCKINDDQSPKGASILRSVQLILSTVRGIDFLEFRPSEIGAAVALSVVGETQTVHTEKAISVLIQHIEKERVLKCVKMIQELSSNSGCAKDTSASVSVPCVPRSPIGVLDAVCFSYKSDDSNAGSCANSSHNSPDAKRRKLNKTCGV 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2255g00014 353 MobiDBLite consensus disorder prediction 339 353 - -
Gabi2255g00014 353 CDD CYCLIN_AtCycD-like_rpt2 197 285 - -
Gabi2255g00014 353 ProSitePatterns Cyclins signature. 95 126 IPR006671 -
Gabi2255g00014 353 SUPERFAMILY Cyclin-like 56 194 IPR036915 -
Gabi2255g00014 353 SMART Cyclin_C_2 197 326 IPR004367 -
Gabi2255g00014 353 CDD CYCLIN_AtCycD-like_rpt1 94 192 - -
Gabi2255g00014 353 FunFam D2/4-type cyclin 78 190 - -
Gabi2255g00014 353 FunFam D6-type cyclin 191 283 - -
Gabi2255g00014 353 Gene3D - 67 284 - -
Gabi2255g00014 353 MobiDBLite consensus disorder prediction 326 353 - -
Gabi2255g00014 353 Pfam Cyclin, C-terminal domain 197 294 IPR004367 -
Gabi2255g00014 353 SMART cyclin_7 100 188 IPR013763 -
Gabi2255g00014 353 Pfam Cyclin, N-terminal domain 65 194 IPR006671 -
Gabi2255g00014 353 Gene3D - 78 195 - -
Gabi2255g00014 353 PANTHER CYCLINS 62 290 IPR039361 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2255g00014 Gabi-Chr2255 189988 192101 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2255g00014 34 333 Core Cell Cycle Gene Families AT2G22490 49.363 2.86e-90 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2255g00014 K18810 - gmx:100803873 571.237