Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2254g00006 ATGAGACCAAGTGGAATGGAAAAAACATATACATTATGGTTCTTCTTTATTGAAATCTTTGTACATGTTTCCATATCAAGAAGTGGCAAAGTTCCTGCAATAATAGTGTTTGGAGACTCCTCTGTGGACACAGGTAACAACAACTTCATTCCAACCATTGCAAAGAGCAACTTTGAACCATATGGTCGTGATTTTTTCAATGGTAATCCTACTGGTCGCTTCTCTAATGGACGCATTCCCCCTGACTTCATCTCTGAGGCCTTTGGCCTTAAGCCAACAGTTCCTGCTTACTTGGATCCATCTTATAGTATACAAGATTTTGCTACTGGTGTTTGCTTTGCATCTGCTGGAACAGGATTTGACAATGCTACTTCAAATGTTGCTGGTGTCATACCTCTATGGAAAGAAGTTGAGTACTATAAGGACTACCAAAAGAAAATGAGAGCCTATCTTGGTGAGGAGAAGGCTAATGAAATATTAAGGGAGGCTTTGTATTTAGTTAGCATAGGAACAAATGACTTCCTTGAGAACTATTACACACTCCCTCAACGTAGGTTTCAATTCAATACTGTTCAGCAATATGAAGATTTTCTCATTGGACTTGCTGAGAATTTCCTTAGGGAAATTTATGATCTTGGAGCAAGGAAAATTTCTCTGACAGGGTTGCCTCCAATGGGGTGTCTGCCATTGGAGAGGGCCATAAACATTTTGGACAACCATGATTGTGTGGAGGGATACAACAATGTGGCTTTGGAATTCAATGGAAAATTGGGATGTTTAGTGACAAAGCTGAATAAGGACCTCCCTGGGTTTCAATTGGTAGATGCAAATGCTTATAATATGCTACTACAAATCGTTGCACATCCTCCTCGTTTTGGTTTCGAGGTTGCAAGAGTTGGATGCTGTGGAACAGGTAGATTTGAGATGGGTTACATGTGCGACCCAAAAAGCCCATTTACATGCACAGATGCAAATAAATTTGTATTTTGGGATGCCTTTCACCCCTCAGAAAAAACAAGTCAGATAGTCTCAAATTATTTAATAGAAAAATATCTAGCAAAGTTTCGTTGA 1071 0.394 MRPSGMEKTYTLWFFFIEIFVHVSISRSGKVPAIIVFGDSSVDTGNNNFIPTIAKSNFEPYGRDFFNGNPTGRFSNGRIPPDFISEAFGLKPTVPAYLDPSYSIQDFATGVCFASAGTGFDNATSNVAGVIPLWKEVEYYKDYQKKMRAYLGEEKANEILREALYLVSIGTNDFLENYYTLPQRRFQFNTVQQYEDFLIGLAENFLREIYDLGARKISLTGLPPMGCLPLERAINILDNHDCVEGYNNVALEFNGKLGCLVTKLNKDLPGFQLVDANAYNMLLQIVAHPPRFGFEVARVGCCGTGRFEMGYMCDPKSPFTCTDANKFVFWDAFHPSEKTSQIVSNYLIEKYLAKFR 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2254g00006 356 Gene3D SGNH hydrolase 20 353 IPR036514 -
Gabi2254g00006 356 FunFam GDSL esterase/lipase APG 23 352 - -
Gabi2254g00006 356 Pfam GDSL-like Lipase/Acylhydrolase 34 347 IPR001087 GO:0016788
Gabi2254g00006 356 PANTHER GDSL ESTERASE/LIPASE EXL3 17 347 - -
Gabi2254g00006 356 CDD SGNH_plant_lipase_like 32 351 IPR035669 -
Gabi2254g00006 356 SUPERFAMILY SGNH hydrolase 163 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2254g00006 Gabi-Chr2254 178172 181419 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2254g00006 28 349 Pollen Coat Proteome AT1G75910 37.037 1.91e-67 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2254g00006 - - gmx:100778745 605.134