Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2251g00030 ATGTTTTCTAGATTGATACATCCCCATGAAGGGACTGTTGTTGGGCAGGAAGACATGCAGGGTGGTTCGAATCATAGTCACCTCGGAGACCCGTGTCTTGTTTTGACTTCTGATCCAAAACCTCGCCTTCGTTGGACCTCTGACCTTCATGAACGTTTTGTTGATGCTGTCACTCAACTTGGGGGTCCTAGTAAAGCCACACCAAAAGCAATCATGAGGACTATGAATGTGAAGGGTTTAACACTCTATCATTTAAAGAGTCATCTTCAGAAGTACAGACTTGGTAAGCAATCAGGAAAAGATTCTGACGAGGGATGCAAAGATGCTTCATATCCACTAGAAAACCCTGGTACTGATAACTCATCTCCAAGGTTACCAGCTTCTGATGCAAATGAGGGTCATGAAGTCAAGGAGGCACTAAGAGAACAGATGGAAGTGCAAAGCAAACTACATTTACTAGTGGAGGCAGAGAAGCATTTGCAAATTCGCCAGGATGCAGAGCGGAGATATATGGCCATGCTTGAGAGAGCTTGTAAGATGTTGGCGGATCAATTTATTGGTGATACAATTATAGACACAGACAACCAAAAATTTCAAGGACTGGAAAGTAAAGCATCAAGAAGTTTGTTAGTTGATCCTCTTGGCTGTTGCCCCCTACCATATACTGAGGTTGGTGGAATGCATGTTTCAGAAGTACCACCTATTTTCCAGCCTCAAGGGGCTGATTGTTCCACCGAAAGTTGCCTAACATCACTTGAAAGTCTCGGAGGGTTGACATTGGAAGGATCTCCTGGCGGGTCAAAGAAGAGGATACTCAGCTTGGACTCAATGGTAGCACCTTTGTTCTGGAGTGAAACCAACATGAGAACTCAAGGCATCCATTTAACCCAGGTCCATCCTCAAGGAATAACTAGGTATGGCATGTAG 927 0.4434 MFSRLIHPHEGTVVGQEDMQGGSNHSHLGDPCLVLTSDPKPRLRWTSDLHERFVDAVTQLGGPSKATPKAIMRTMNVKGLTLYHLKSHLQKYRLGKQSGKDSDEGCKDASYPLENPGTDNSSPRLPASDANEGHEVKEALREQMEVQSKLHLLVEAEKHLQIRQDAERRYMAMLERACKMLADQFIGDTIIDTDNQKFQGLESKASRSLLVDPLGCCPLPYTEVGGMHVSEVPPIFQPQGADCSTESCLTSLESLGGLTLEGSPGGSKKRILSLDSMVAPLFWSETNMRTQGIHLTQVHPQGITRYGM 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2251g00030 308 MobiDBLite consensus disorder prediction 95 132 - -
Gabi2251g00030 308 MobiDBLite consensus disorder prediction 1 32 - -
Gabi2251g00030 308 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 37 97 IPR017930 -
Gabi2251g00030 308 FunFam Myb family transcription factor 39 97 - -
Gabi2251g00030 308 Pfam Myb-like DNA-binding domain 43 93 IPR001005 -
Gabi2251g00030 308 Pfam MYB-CC type transfactor, LHEQLE motif 135 180 IPR025756 -
Gabi2251g00030 308 NCBIfam myb-like DNA-binding domain, SHAQKYF class 40 95 IPR006447 GO:0003677
Gabi2251g00030 308 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 12 206 IPR044848 GO:0003700
Gabi2251g00030 308 Gene3D - 39 97 - -
Gabi2251g00030 308 SUPERFAMILY Homeodomain-like 40 96 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2251g00030 Gabi-Chr2251 202140 205567 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2251g00030 29 252 G2-like Transcription Factor Family AT3G24120 48.739 2.88e-64 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Gabi2251g00030 Myb_DNA-binding 1.6e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2251g00030 - - gmx:100779871 504.212