Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2251g00022 ATGGGAATGGCGGTGGCAAGTGTTGATTTGCTCAGTGAAAAAGCAGCCATGATGAGAGAGTCTCTGCAGAAGAGCCAAACCATCACGGACAACGTTGTTTCCATCCTTGGTTCCTTTGACCACCGTCTCTCCGCCCTTGAAACCGCCATGCGTCCTACTCAGATTAGAACTCATTCTATTAGGAAAGCTCATGAGAATATTGATAAGACTTTGAAGATTGCTGAGGTTATCTTGGCTCACTTTGATCAATTTCGTCAGGCAGAGGCAAAAATACGTGAAGGACCACATGAAGACCTGGAAAACTATCTCGAAGCAATTGACAAGTTGAGAAGCAACATTCAGTTTTTTGGCAGTAAGAGGGATTTTAATAGCACTGATGCTGTCATCAGCCATGCTAATAATATGCTAGCTAAAGCTATTTCTAACCTAGAAGATGAGTTTAAGCAGCTATTATCGTCTTACAGCAAACCTGTGGAACCTGAGCGTCTCTTTGATTGCCTTCCGAACTCAATGCGACCTTCATCAGGATCACCTGGCCTTGAGGGTGATCCTAGTGGCAAGAATCCTTCTCATCACCATTCTGACCTTCACAACAATAATGCTGATGCTGTTGTATACACACCTCCTGCTCTTATACCGCCAAGAATTTTGCCACTGTTACATGATTTAGCTCAGCAAATGGTTGAAGCTGGTCACCGACAACAGTTACTCAAAATATACAGAGATGCCCGTTCAAATGTATTGGAAGAAAGCCTCCAAAAACTTGGAGTTGAGAAACTCAACAAAGACGATGTTCAAAAGCTACAATGGGAGATTTTGGAAGCCAAAATTGGAAACTGGATTCATTTCATGCGAATAGCGGTGAAATTGTTGTTTGCTGGTGAGAGGAAAGTTTGTGATCAGATATTTGAAGGCTTTGATTCACTAAGTGAACAGTGTTTTGCTGAGGTAACTACAAACAGTGTCTCCATGCTACTTAGTTTTGGAGAAGCAATAGCCAAAAGCAAGAGGTCCCCAGAAAAGTTGTTTGTACTTTTGGACATGTATGAAATCATGCAAGAGCTCCATTCAGAGATTGAAGCACTTTTTAAAGGCAAAGCTTGCACTGAAATAAGAGAAGCTGCAATGAGTTTGACAAAACGACTTGCACAAACAGCCCAGGAGACTTTTGGAGATTTTGAAGAAGCAGTTGAAAAGGATGCTACAAAGACTGCAGTAACCGATGGAACTGTCCATCCTTTGACAAGCTACGTTATTAACTACGTGAAGTTTTTATTTGACTACCGGTCCACCTTGAAGCATCTATTCCAAGAATTTGAAGGTGGAGATGATTCTTCGCAGCTAGCATCTGTAACAATGCGAATAATGCAAGCTTTGCAAACCAATTTAGATGGGAAATCAAAGCAGTATAAAGACCTTGCATTGACACATCTTTTCCTCATGAACAATATTCATTATATTGTCAGATCGGTTCGGAGGTCTGAAGCCAAGGATTTGCTGGGGGATGATTGGGTACAACGACATAGGAGGATTGTGCAGCAGCATGCAAATCAATACAAAAGAAATGCGTGGGCGAAGATTCTCCTGTGCCTATCTATTCAGGGCCTTACCTCATCAGGTGGTGGGAGTGGTACTGGTGGTGGTGATGGTGGAACTGGAAGTAATAGTGGTGCTTCAAGGGCAGTTGTTAAAGACAGGTTTAAGTCATTCAATGTTATGTTTGAGGAAATCCATCAGAAACAATCTCAATGGACAGTTCCTGATTCTGAGTTGCGAGAGTCTCTTAGACTTGCAGTTGCTGAAGTCTTGTTGCCCGCCTATAGATCTTTTGTAAAGCGTTTTGGGCCTTTAGTGGAGAGTGGAAAGAATCCTCAGAAGTACATCAAATACACAGCAGAAGATCTAGATAGAATGCTGGGTGAATTTTTTGAAGGAAAAAACATGACAGAAACGAAGCGGTAA 1962 0.4195 MGMAVASVDLLSEKAAMMRESLQKSQTITDNVVSILGSFDHRLSALETAMRPTQIRTHSIRKAHENIDKTLKIAEVILAHFDQFRQAEAKIREGPHEDLENYLEAIDKLRSNIQFFGSKRDFNSTDAVISHANNMLAKAISNLEDEFKQLLSSYSKPVEPERLFDCLPNSMRPSSGSPGLEGDPSGKNPSHHHSDLHNNNADAVVYTPPALIPPRILPLLHDLAQQMVEAGHRQQLLKIYRDARSNVLEESLQKLGVEKLNKDDVQKLQWEILEAKIGNWIHFMRIAVKLLFAGERKVCDQIFEGFDSLSEQCFAEVTTNSVSMLLSFGEAIAKSKRSPEKLFVLLDMYEIMQELHSEIEALFKGKACTEIREAAMSLTKRLAQTAQETFGDFEEAVEKDATKTAVTDGTVHPLTSYVINYVKFLFDYRSTLKHLFQEFEGGDDSSQLASVTMRIMQALQTNLDGKSKQYKDLALTHLFLMNNIHYIVRSVRRSEAKDLLGDDWVQRHRRIVQQHANQYKRNAWAKILLCLSIQGLTSSGGGSGTGGGDGGTGSNSGASRAVVKDRFKSFNVMFEEIHQKQSQWTVPDSELRESLRLAVAEVLLPAYRSFVKRFGPLVESGKNPQKYIKYTAEDLDRMLGEFFEGKNMTETKR 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2251g00022 653 Gene3D Exocyst complex component Exo70 186 653 - -
Gabi2251g00022 653 Gene3D Exocyst complex component Exo70 75 178 - -
Gabi2251g00022 653 Pfam Exo70 exocyst complex subunit 279 640 IPR046364 GO:0000145|GO:0005546|GO:0006887
Gabi2251g00022 653 SUPERFAMILY Cullin repeat-like 77 644 IPR016159 -
Gabi2251g00022 653 PANTHER EXOCYST COMPLEX PROTEIN EXO70 58 645 IPR004140 GO:0000145|GO:0006887
Gabi2251g00022 653 MobiDBLite consensus disorder prediction 164 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2251g00022 Gabi-Chr2251 127201 136753 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2251g00022 3 653 EXO70 exocyst subunit family AT5G03540 73.785 0.0 983
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2251g00022 K07195 - gmx:100813987 1154.04