Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2251g00011 ATGGTGTTCACATATGCCATAGCATTTGTAGTTGGGTTAATGTTCGCAATTCTCACAATAGCTTTTGCGTGTGTGAGGCTTCGAATGACTCGCACCCCCAACATACTAAGTATTTTGGCTGGTATTCCACCATCTCATCATCAAGCAGGAGAATTAGGCATAGTTGAAGATATGGAACAAGGTCTTCATCTTAATCATAATCATAATCATGATATTGACACAAGTTTTGATAGCTACCCCAAGTTGTTATACTCAGAAGTAGAGAAGAATAAAGATGGTTATTCGAGCTGCTCCATCTGCTTAGGCGATTACAAAGAAACTGACATGTTGAGGTTACTTCCTGATTGTGGCCATCTCTACCATCTTGATTGTGTTGATCCATGGCTCAGGTTACATTCCACATGTCCCATTTGTCGAAAATCTTCGGTTCAAACTCCTCGCTCTAGTGCCTCCATTGTTGGGGAATCCGCTACTATCCCTGTTGTGTAG 489 0.4151 MVFTYAIAFVVGLMFAILTIAFACVRLRMTRTPNILSILAGIPPSHHQAGELGIVEDMEQGLHLNHNHNHDIDTSFDSYPKLLYSEVEKNKDGYSSCSICLGDYKETDMLRLLPDCGHLYHLDCVDPWLRLHSTCPICRKSSVQTPRSSASIVGESATIPVV 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2251g00011 162 CDD RING-H2_EL5-like 96 139 - -
Gabi2251g00011 162 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 58 143 IPR013083 -
Gabi2251g00011 162 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 3 148 IPR045899 -
Gabi2251g00011 162 Pfam Ring finger domain 96 139 IPR001841 -
Gabi2251g00011 162 ProSiteProfiles Zinc finger RING-type profile. 97 139 IPR001841 -
Gabi2251g00011 162 SMART ring_2 97 138 IPR001841 -
Gabi2251g00011 162 SUPERFAMILY RING/U-box 77 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2251g00011 Gabi-Chr2251 69527 70015 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2251g00011 71 149 C3H Transcription Factor Family AT2G35910 58.228 2.24e-25 95.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2251g00011 - - gmx:102663718 181.8