Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2246g00014 ATGGCTGAAATAGCGGTGAACCTGTTGATGGACAAGTTGATTCCATTACTGACGTACGAAGTGGGACTCCTGAAAGAGGTGCACACGCAGGTGAGGTTCATCAAAGATCAACTAGGCCTAATAAGAGCATACTTGAGAGATGCAGATGTGAAGGCAGAGAAAGAAGACAAAAGCGACGTAGTGAAAGAGTGGGTGAAGCAAGTGAGGGAAGTTGCACATAGCATAGAAGATGCCATCGATGAGTACTTGCTCCAAGTTGCTCAGCGTCGCCAAAAGCGTGGCATCGCTGGTGTTGTTGAGAAAATTGTTTGGTTGCTCAGAAGCATAGAACCACGCCATACGATTACGTCACAGATTCGTGACATCAACACCATGATAGAAACCCTTGACAAAAGGAAAGACACGTTGGGGTTCAACCCTTCTTCAGATTCAGAATCATCCACTAGTTCTCTTCATCATGGTCATGACCTTCGAAAGGGTACTCTCTTCCTTGAGGATGCACAGCTTGTTGGAATCAATGATACAAGGAAGAAACTCAAAAGCTTGCTGCTCGATGAAGATAGCAGACGCACCGTCATCGCAGTGGTTGGCCCAGGCGGACTTGGTAAAACAACGATTGCAAAGAAACTATTTGAGAAGCAGAAGAATAAGAGGTTCGATTGTGGCGCATGGGTGAGTGTGTCTAGCAAGTTCAAGGAGAAAGCAATACTGAAATCAATGTTGCAGAACTTTTATGATGAGAAGGACGAAGACGATGACTCTCAGACCAAGTTGATTGAACAAATGAAAAAGGCCACCCTGATAAGAAAAGTGAGAGAACACTTGAAAGAAAAAAGCTACATGATTGTATTTGACGATGTTTGGGAAGAAGATTTTTGGGGGCGTGTGGAATATGTATTACCAGAGAACAACAAAAGGAGTAGGGTAATCATCACAACAAGACACAAGGGTGTTGCTGAGTTTTGCAAACGTTCTGCGCATGTTCATATCCACGAGTTGCAAAGTCTATGTCCAAGCGATGCTATGGATCTGTTCAATCTGAAGGCATTTCATCAACTCAAGCCAGAAGGGTATTCAACAGAATTGATGAAATTGTCAAAAGACATCGTGAAGAAGTGTGATGGAGTGCCACTCGCAATTGTGGCCATTGCTAGCCTCCTTTCCACAAAGAACAACAACTATTCTGAATGGAAGAAGGTTCATGATAGTCTTGGTTCAAAACTAGCAAGCGATCCTCATCTCAAAAGCTTCCATCGAGTCTTATCAGAAAGTTACAATGATCTCCCTTTCCACCTAAAGCCATGCCTATTGTATTTTGGCATTTTCCCTGATGACTACTCCGTTAGCTGCACGAGACTTATACGTCTATGGGTAGCAGAAGGATTGGTGAATGTAAAAGAGAATGAAAACCGTACCCAAGAGGAAGTTGCAGAAGAATACTTGCATGAATTGATACGTAGGAGTCTAGTTACAGTGTCCTCTGAGTTTTTGGATGGCAGGGTAAAAAACATTAGGGTGCATGATCTGATGCATGACTTTATTAAGGACAAGTGTGTGGAGTTGGACTTTTGCCAAGTGATAAAAAGTGAAAACTTCACCTTCAATTCAACAACTCGAAGATTGTCAATCCAATTTCAAGGTAGCGGAGAAGATGCTGTTCTTGCAAGAGCTGTTGCAGCAAATCATGATCGAGTGCGCTTTTGTTTTGCTTTTAACTTGGAGGAGCTCCCAAGGCCTCTGTTGAAATCATTCCTCTCCAATTTCAAGCTCTTGGTTGGATTAGACTTTGAAGATTCCCCTCTCGATGATCTTCCTGAACCGGTTGGAAACTTGTTGCATTTGAAGTATTTAAACTTAAGGAATACTAGAATCAAGAACCTTCCAAAGTTCATTGGCAAGCTTCAGAACCTACAGACTCTGGACCTGAAATATACTCAAGTACGCGAATTACCTATAGAGGTTAACAAACTCACCAAGCTGCACCATCTTCTAGCTTATTCTGACAACGAGGAATTCGATTTCAGTATAGCATCCATGCAAGGAGTTGTGATAAAGGAAGGGATTGGGCGTCTAAAGGCCCTGCAGCAGCTATTCAAGGTTGATATGACTAATGGGGATGGCCTAATCAAGGAAGTGCAAAGTTTGAAGCAGTTGAGGGGATTTGGCATTATCAAGCTAAGAAGACACAATGGAAAACCATTATGTATTGCAATTGAAGGCATGACGCGTCTTCAGTCACTGAGCATTGCAGCAGCAGGAGAGAATGAGATACTTGACCTGCATTCATTGGTTAATCCTCCTCACCAACATCTCCAACGCCTAAACTTGTATGGCCGTTTGGAAACAGTGCCTCTTTGGATTCCAAAACTTCATGTTCTGGTAAGGTTATTCTTGAATTGGTCAGGACTAACGGAAGATCCACTACCAATGCTTAAAGACTTGACAGAGTTAATGGAGCTTGAGCTTTACAGTGCATTTGAAGGTGTTGAGTTGTGTTTTGGAGACGGGTGGTTCAAAAAGTTGAAGGTTTTAAGCCTAGAAAATATGCAAGCCTTGAAGACCTTGAAAATTCATACAGGAGCATTGCCTATTCTTCAAAAGCTAACCATTGGGCCGTGCCCTCAAATGGTGGAGGTTCCCCATGATATCACAAACCTACAGGCTCTCGAACATCTTCGATTCTATGAAATGCCTATGAACTCAACAGAAGGAAAGGACTTTGGCATATTGAAGGACATATCATTTGTGATTTACTCCAAGGGAAGCAAATTCTACACCCTTCATAGCGATGCAAAGACTGAAACTGGTGATTTTTAG 2817 0.4249 MAEIAVNLLMDKLIPLLTYEVGLLKEVHTQVRFIKDQLGLIRAYLRDADVKAEKEDKSDVVKEWVKQVREVAHSIEDAIDEYLLQVAQRRQKRGIAGVVEKIVWLLRSIEPRHTITSQIRDINTMIETLDKRKDTLGFNPSSDSESSTSSLHHGHDLRKGTLFLEDAQLVGINDTRKKLKSLLLDEDSRRTVIAVVGPGGLGKTTIAKKLFEKQKNKRFDCGAWVSVSSKFKEKAILKSMLQNFYDEKDEDDDSQTKLIEQMKKATLIRKVREHLKEKSYMIVFDDVWEEDFWGRVEYVLPENNKRSRVIITTRHKGVAEFCKRSAHVHIHELQSLCPSDAMDLFNLKAFHQLKPEGYSTELMKLSKDIVKKCDGVPLAIVAIASLLSTKNNNYSEWKKVHDSLGSKLASDPHLKSFHRVLSESYNDLPFHLKPCLLYFGIFPDDYSVSCTRLIRLWVAEGLVNVKENENRTQEEVAEEYLHELIRRSLVTVSSEFLDGRVKNIRVHDLMHDFIKDKCVELDFCQVIKSENFTFNSTTRRLSIQFQGSGEDAVLARAVAANHDRVRFCFAFNLEELPRPLLKSFLSNFKLLVGLDFEDSPLDDLPEPVGNLLHLKYLNLRNTRIKNLPKFIGKLQNLQTLDLKYTQVRELPIEVNKLTKLHHLLAYSDNEEFDFSIASMQGVVIKEGIGRLKALQQLFKVDMTNGDGLIKEVQSLKQLRGFGIIKLRRHNGKPLCIAIEGMTRLQSLSIAAAGENEILDLHSLVNPPHQHLQRLNLYGRLETVPLWIPKLHVLVRLFLNWSGLTEDPLPMLKDLTELMELELYSAFEGVELCFGDGWFKKLKVLSLENMQALKTLKIHTGALPILQKLTIGPCPQMVEVPHDITNLQALEHLRFYEMPMNSTEGKDFGILKDISFVIYSKGSKFYTLHSDAKTETGDF 938
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2246g00014 938 CDD RX-CC_like 2 126 IPR038005 -
Gabi2246g00014 938 Gene3D Ribonuclease Inhibitor 557 919 IPR032675 -
Gabi2246g00014 938 PRINTS Disease resistance protein signature 192 207 - -
Gabi2246g00014 938 PRINTS Disease resistance protein signature 632 648 - -
Gabi2246g00014 938 PRINTS Disease resistance protein signature 373 387 - -
Gabi2246g00014 938 PRINTS Disease resistance protein signature 274 288 - -
Gabi2246g00014 938 Pfam Rx N-terminal domain 5 92 IPR041118 -
Gabi2246g00014 938 Gene3D - 425 518 IPR036388 -
Gabi2246g00014 938 Gene3D - 151 331 IPR027417 -
Gabi2246g00014 938 FunFam Probable disease resistance protein At1g63360 425 515 - -
Gabi2246g00014 938 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 157 439 IPR027417 -
Gabi2246g00014 938 SUPERFAMILY L domain-like 505 910 - -
Gabi2246g00014 938 Gene3D - 336 424 IPR042197 -
Gabi2246g00014 938 PANTHER DISEASE RESISTANCE PROTEIN RP 59 852 IPR044974 GO:0006952
Gabi2246g00014 938 Gene3D - 4 116 - -
Gabi2246g00014 938 Pfam NB-ARC domain 177 426 IPR002182 GO:0043531
Gabi2246g00014 938 FunFam Probable disease resistance protein At1g61300 155 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2246g00014 Gabi-Chr2246 291739 295837 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2246g00014 192 380 WRKY Transcription Factor Family AT5G45050 28.351 3.51e-10 62.4