Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2240g00001 ATGGAGTCTGAAAGTGTCGTTTCTCCGCCGACGATGTCGGAGAACATAGACGTTCTTGATCTCTCGCCCGAGGAATCCGAAAATGTTCATGTTTTAGCCGTTGATGACAGCATCGTTGATCGCAAGGTCATTGAAAGTTTGCTCAAAGTCTTACCTTGTAAAGTTACTACCGTGGATAGTGGACTCAGCGCACTGCAATTTCTTGGACTAGAGAACCAGGAAATGCGCAATGATTTTGTCCAAGTGGATCTAATTATCACGGATTATTGTATGCCCGGAATGAATGGTTATGAACTGCTCAAGAAAATTAAGGAATCGTCCACTTTCAGAGAAATTCCTGTGGTGATTATGTCCTCTGAAAACATTCTTCCGCGCATAGACAGTTGCTTGAAGGAAGGTGCAAAGGAATTCATAGTGAAGCCTGTGAAATTATCTGACGTGAAACGTTTGAGAAATTACATGACAACAGACAGAGCATGTGGCAGTGGCGGTGGAATCAACAAAAGGAAGCTTCCAGACATCTCTGATGTGTCTTCATTACCGCCGTCTGATTCCTCGTCGACAATTTCATCACCACCGTCACCTTCTTCTCCATCACCTTCATTGTCACCCTCCTCCGTGATTGACTCTCCAATCAGACGGCTCAAAATGACCAGCACTGATTGA 666 0.4444 MESESVVSPPTMSENIDVLDLSPEESENVHVLAVDDSIVDRKVIESLLKVLPCKVTTVDSGLSALQFLGLENQEMRNDFVQVDLIITDYCMPGMNGYELLKKIKESSTFREIPVVIMSSENILPRIDSCLKEGAKEFIVKPVKLSDVKRLRNYMTTDRACGSGGGINKRKLPDISDVSSLPPSDSSSTISSPPSPSSPSPSLSPSSVIDSPIRRLKMTSTD 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2240g00001 221 CDD REC_typeA_ARR 31 150 - -
Gabi2240g00001 221 SMART REC_2 29 151 IPR001789 GO:0000160
Gabi2240g00001 221 SUPERFAMILY CheY-like 28 149 IPR011006 -
Gabi2240g00001 221 Gene3D - 29 168 - -
Gabi2240g00001 221 MobiDBLite consensus disorder prediction 178 192 - -
Gabi2240g00001 221 Pfam Response regulator receiver domain 31 147 IPR001789 GO:0000160
Gabi2240g00001 221 PANTHER TWO-COMPONENT RESPONSE REGULATOR 29 169 IPR045279 GO:0009736
Gabi2240g00001 221 MobiDBLite consensus disorder prediction 158 221 - -
Gabi2240g00001 221 MobiDBLite consensus disorder prediction 201 221 - -
Gabi2240g00001 221 ProSiteProfiles Response regulatory domain profile. 30 155 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2240g00001 Gabi-Chr2240 11252 12533 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2240g00001 23 213 Response Regulator Gene Family AT1G59940 56.863 4.41e-69 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Gabi2240g00001 Response_reg 3.9e-21 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2240g00001 K14492 - gmx:100305926 240.736