Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2238g00002 ATGGCAGAGAAGATGGTAATGGTTGTGGAGATGATGACGGTGGCAGTGGAAGTGGCTACGACGACGATGGTTGTGATGGTGATGGGCTTGATTGAGGATATATTTGGAGCTGGAAGTGAAACATCAGCTACAACAATAACATGGGCAATGGCAGAGATGATTAAAAATCCAAGAGTAATGAAGAAGGTACAAGATGAGGTAAGAGAGGTATTTGATGAAGAAGGAAATCCCAGTGAAAGTGGCATTGAGAAACTAAAATATTTGAAATCAGTTGTGAAAGAGACATTAAGATTACACCCTCCTGTTGCTCTTTCACTTCCAAGAGAATGTAGACAAGCTTGTGAGATTAAGGGGTATCATATACCTGTGAAAAGCAAGGTCATCGTGAATGCTTGGGCAATTGAAAGAGATCCAAATCATTGGAATGAGGCTGAGAGGTTTTATCCTGAAAGGTTCATTCAAAGTTCTTGTGACTACAAAGGCAATAATTTTGAATTCATCCCATTTGGTGTTGGGAGAAGAATATGCCCTGGCCTCACATTTGGGTTGATCAACGTTGAGTTTCCACTTGCATTGTTGATGTATCATTTTGATTGGAAATTGCCCAATGGAATGAAAAACAAAGATTTGGACATGACTGAGACTTTTGGACTAACTTTTGGTCGAAAAGATAATTTGTACCTGATTTCCATCGCTTCTCACTGTTAG 708 0.3969 MAEKMVMVVEMMTVAVEVATTTMVVMVMGLIEDIFGAGSETSATTITWAMAEMIKNPRVMKKVQDEVREVFDEEGNPSESGIEKLKYLKSVVKETLRLHPPVALSLPRECRQACEIKGYHIPVKSKVIVNAWAIERDPNHWNEAERFYPERFIQSSCDYKGNNFEFIPFGVGRRICPGLTFGLINVEFPLALLMYHFDWKLPNGMKNKDLDMTETFGLTFGRKDNLYLISIASHC 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2238g00002 235 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 169 178 IPR017972 GO:0005506|GO:0016705
Gabi2238g00002 235 SUPERFAMILY Cytochrome P450 27 229 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2238g00002 235 PRINTS P450 superfamily signature 176 187 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2238g00002 235 PRINTS P450 superfamily signature 90 101 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2238g00002 235 PRINTS P450 superfamily signature 37 54 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2238g00002 235 PRINTS P450 superfamily signature 167 176 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2238g00002 235 Pfam Cytochrome P450 30 219 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2238g00002 235 Gene3D Cytochrome P450 6 225 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2238g00002 235 PRINTS E-class P450 group I signature 89 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2238g00002 235 PRINTS E-class P450 group I signature 130 154 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2238g00002 235 PRINTS E-class P450 group I signature 46 72 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2238g00002 235 PRINTS E-class P450 group I signature 166 176 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2238g00002 235 PRINTS E-class P450 group I signature 176 199 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2238g00002 235 PRINTS E-class P450 group I signature 26 43 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2238g00002 235 FunFam Predicted protein 35 228 - -
Gabi2238g00002 235 PANTHER OS08G0105600 PROTEIN 29 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2238g00002 Gabi-Chr2238 18459 19739 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2238g00002 29 234 Cytochrome P450 AT3G26230 53.846 9.20e-75 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2238g00002 - K13267 gmx:100813216 327.02