Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2236g00033 ATGTATTCGTCAAATAGCTCCATCAACGGCAATGACCTAATCTCCTACTCTAACCAACCATTTTTCTATAGGCCTTTTTCCATTGAAAGCAACACATCTTCAAAAGAAGAAAACAATTGTGCCCTTCTTCCTCTTCCTCCTTTGTCCTTTCTTCAATTCCCTTCTCCCTTTGAAGACAACGAAATCTTCCTTGAACAACAACACCATGATGATCTCTTACCTCATCATCACCAACAATCTCTAGCTGAGATGGATGCTGCAATTATTAACATCAAGAATCCTTGCCATGTAACAACAACAACAACAACAATGGAGCAGATACCAAGAAAAAGATCTAGCAAGAGAGATCGACACAGTAAGATCAACACAGCTCGAGGACTCAGGGATCGGAGAATGAGACTTTCACTTGAAGTTGCAAAGAGGTTTTTTGGCCTTCAAGACATGCTAGGCTTTGATAAAGCTAGCAAAACTGTTGAGTGGTTACTGAACCAAGCAAAAGTTGAAATCAAACAACTTGCTAGAGAGAAGAATCATCCCAGTTATTATTGTAGCAGTTTTGGTGCTAAGAGTGCATCTTCAACTTCTGAATGTGAAGGTGTGTCGAGCTTGGATGAGGTTGCGGTTAGTGGAAATCAAGGTCAAGAAGGGGAAAAGAAGAGAAGAATTAAGGTTTCTAGAAAGAGTGCATTGAATCCTATTGGTAAAGAATCAAGGGAAAAAGCAAGGGAAAGGGCAAGAGAAAGGACAAAAGAAAAGCTTAAAAGTCGAAGACTAGTTCATGAATCAAAACAATGCAATGAAGGAACAAACAATAACCTTAACCGATTGGGTTCATGGAACCCCTTTGAAACGGTAGAAGAACCTGCAGGTACACAGAATCAAAGCTTGGATGTGGTGGCTGAGGCTGAAGAACCATGTTCTCACTCAAAGGAGCATTTGGGAACCATAGAGGATATGACACATGAAGATTCTTTGGTGATGATGAACAAATGGAGCCCAACTACTATGATGTTCAATTCTCTCAATAACTCTGGAATTATCCTTCAAGAAGTAAGTTCAAATTAA 1065 0.3972 MYSSNSSINGNDLISYSNQPFFYRPFSIESNTSSKEENNCALLPLPPLSFLQFPSPFEDNEIFLEQQHHDDLLPHHHQQSLAEMDAAIINIKNPCHVTTTTTTMEQIPRKRSSKRDRHSKINTARGLRDRRMRLSLEVAKRFFGLQDMLGFDKASKTVEWLLNQAKVEIKQLAREKNHPSYYCSSFGAKSASSTSECEGVSSLDEVAVSGNQGQEGEKKRRIKVSRKSALNPIGKESREKARERARERTKEKLKSRRLVHESKQCNEGTNNNLNRLGSWNPFETVEEPAGTQNQSLDVVAEAEEPCSHSKEHLGTIEDMTHEDSLVMMNKWSPTTMMFNSLNNSGIILQEVSSN 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2236g00033 354 MobiDBLite consensus disorder prediction 208 261 - -
Gabi2236g00033 354 MobiDBLite consensus disorder prediction 232 261 - -
Gabi2236g00033 354 Pfam TCP family transcription factor 113 255 IPR017887 -
Gabi2236g00033 354 ProSiteProfiles TCP domain profile. 114 172 IPR017887 -
Gabi2236g00033 354 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 84 332 IPR005333 GO:0003700
Gabi2236g00033 354 ProSiteProfiles R domain profile. 235 252 IPR017888 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2236g00033 Gabi-Chr2236 297139 298203 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2236g00033 1 249 TCP Transcription Factor Family AT3G18550 36.156 6.56e-32 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Gabi2236g00033 TCP 3.2e-45 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2236g00033 - - lang:109345082 353.984