Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2236g00008 ATGGCTCTTCTACCAACATCAGTTCTAAAGCAATTGCTGCATGAGCTAAATTCAACACATTACTTAACTGCTTTCTTCTGCTTCGTAAGCCTCGTGTTTATGCTTAAGCTGAGAAGAAGAAACAAATCCAATTTTCCACCATCACCGCCGAAGCTACCCATTATTGGTCATATTCACCAACTAGGCACACTCCCACACCACTCCTTCCATGCACTTTCTCACAAATATGGCCCTCTCATGATGCTGCAGCTTGGCCAAATTCCTACTCTTGTGGTTTCATCCGTAGATGTGGCCAAAGAAATATTCAAAACCCATGATGTCGCTTTCTCCAGCAAGCCCCAAACCACAGCTGGGAAAATCATTCTCTATGGATGCACTGATGTGGCTTTTGCACCCTACGGCGACGATTGGAGACAGAAAAGGAAGATATGTGTTCTTGAGCTTCTAAGCCTTAAAAGGGTGAGATCCTTTCAATCCATTCGTGAAGAAGAAGTTGCACAACTGGTTGATACGGTACGTGAGGCATGTGAAAGTAAAAGATCCTCTGTGAATCTGAGTGAGATGTTGATTGCAACCTCAAACAACATAGTGTCTAGATGTGTTCTTGGACAAAAATATGATACTCCAGATGGTAGCAGCAGCTTTGGAGAGCTAGGAAGGAAGATGATGGAACAATTAGCGGCTTTCAGTGTGGGAGATTTTTTTCCTTCATTAGGTTGGATCGACGTTCTTACAGGCCAAATATCAGAATTTAAAGCCACTTTCCGTGCATTAGATGCTTTCTTTGATGAGGTGATTGCAGAACACAAGAGAACAAAGAGAGATGATGGCCAATCCGATAATAAAGACTTCGTGGAGATACTCCTTCAAATTCAAGAGGGTGGAAAGTATGATTTTCAGCTCACCCATGATAACATCAAAGCACTCCTAATGGACATGTTTGCTGGAGGAAGTGACACTACTTCAACACTTTTGGAATGGACATTTGCGGAGCTCATGAGGAATCCAAAAGCCATGAAGAAAGTTCAAGAAGAAGTAAGAAGAGTCGTCGGGTATAAATCAAAAGTAGATGAAAATGATGTGAATGGAATGAATTACTTGAAATGTGTAGTCAAAGAAACTTTAAGATTGCGTCCACCTGCTCCTCTATTGATACCTCGAGAAACATTATCTGATGTGAAAGTAAAAGGGTTTGATATTCCGTCCAAAACAAGAGTACTTGTGAATGCATGGGCAATTCAGAGGGACCCTGAATTTTGGAACAGAGCCGAAGAGTTTCTTCCCGAGAGATTTGAAGAACAGCCAGAGGTTTGTTTTAGTGGACAAGATTTGCAATATATACCCTTTGGAAGTGGGAGAAGGGGATGTCCTGGAATATCATTTGGGGTATCTTCCGCTGAGTATATTCTTGCTAATCTGCTATATTGGTTCGATTGGAAGCTGCCCAATATTGGTGTAACTACGCAAGAGATAGATATGAGTGAGATATACGGGCTCACTGTCTGCATGAAAGTACCGCTTCGTCTTGAACCTACACTATACTCATTTGGATCTAAGCCTATCATGTGA 1569 0.4181 MALLPTSVLKQLLHELNSTHYLTAFFCFVSLVFMLKLRRRNKSNFPPSPPKLPIIGHIHQLGTLPHHSFHALSHKYGPLMMLQLGQIPTLVVSSVDVAKEIFKTHDVAFSSKPQTTAGKIILYGCTDVAFAPYGDDWRQKRKICVLELLSLKRVRSFQSIREEEVAQLVDTVREACESKRSSVNLSEMLIATSNNIVSRCVLGQKYDTPDGSSSFGELGRKMMEQLAAFSVGDFFPSLGWIDVLTGQISEFKATFRALDAFFDEVIAEHKRTKRDDGQSDNKDFVEILLQIQEGGKYDFQLTHDNIKALLMDMFAGGSDTTSTLLEWTFAELMRNPKAMKKVQEEVRRVVGYKSKVDENDVNGMNYLKCVVKETLRLRPPAPLLIPRETLSDVKVKGFDIPSKTRVLVNAWAIQRDPEFWNRAEEFLPERFEEQPEVCFSGQDLQYIPFGSGRRGCPGISFGVSSAEYILANLLYWFDWKLPNIGVTTQEIDMSEIYGLTVCMKVPLRLEPTLYSFGSKPIM 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2236g00008 522 PRINTS P450 superfamily signature 369 380 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2236g00008 522 PRINTS P450 superfamily signature 447 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2236g00008 522 PRINTS P450 superfamily signature 316 333 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2236g00008 522 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 449 458 IPR017972 GO:0005506|GO:0016705
Gabi2236g00008 522 Gene3D Cytochrome P450 31 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2236g00008 522 FunFam Cytochrome P450 83B1 33 510 - -
Gabi2236g00008 522 PRINTS E-class P450 group I signature 97 118 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2236g00008 522 PRINTS E-class P450 group I signature 446 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2236g00008 522 PRINTS E-class P450 group I signature 73 92 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2236g00008 522 PRINTS E-class P450 group I signature 192 210 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2236g00008 522 PRINTS E-class P450 group I signature 305 322 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2236g00008 522 PRINTS E-class P450 group I signature 456 479 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2236g00008 522 PRINTS E-class P450 group I signature 325 351 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2236g00008 522 PRINTS E-class P450 group I signature 409 433 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2236g00008 522 PRINTS E-class P450 group I signature 368 386 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2236g00008 522 PANTHER CYTOCHROME P450 71B11-RELATED 32 511 - -
Gabi2236g00008 522 Pfam Cytochrome P450 46 483 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2236g00008 522 SUPERFAMILY Cytochrome P450 46 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2236g00008 522 CDD CYP71-like 75 507 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2236g00008 Gabi-Chr2236 86081 87734 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2236g00008 36 507 Cytochrome P450 AT3G48270 43.975 1.51e-144 423
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2236g00008 K20617 - gmx:100792382 683.715