Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2234g00032 ATGAGCTTTACTTTCTTCCTTCTCTTCCTCCTCTTCTTCTTTCACCCTGTCGTTTCTCTTTCCTCCGACGGCCTTGCACTTCTAACTTTAAAATCCGCCGTCGATGGCGGCGGCGCCTCCGTGCTCTCCGACTGGAACGACGGAGACCCCACCCCGTGCCGGTGGTCCGGCATTAGCTGCGCCAACATCTCCGGCCTTCCGGAGCCCCGCGTCGTCGGAATCGCCCTTTCCGGCAAGGGTCTCCGAGGCTACCTCCCGTCGGAGCTCGGCACTCTTCTCTACCTCCGCCGTCTCAACCTCCACACCAACGCCTTCCGCGGCTCCATCCCCTCCCAGCTCTTCAACGCCACCGCACTTCACAGTATCTTCCTCCACAGCAACAACCTCTCCGGCAACCTCCCTCCCTCCGTCTGCAACCTCCCCCGCCTCCAAAACCTCGACCTCTCCGACAACTCTCTCACCGGCGCCATCCCTGAGTCAATCAGAAACTGCTCGCAACTCCAGCGCCTGATCCTCGCCCGGAACAAATTCTCCGGCGAGATTCCGGCGGCTCCGTGGCCGGACCTGCAGAGCCTAGTCCAGCTCGACCTGTCCGCTAACCTTCTAGAAGGTTCGATCCCGGACCAAATCGGCGATCTGAGGTCCCTCGCCGGAAGCCTAAACCTCTCGTTCAATCACCTAACCGGTAAGCTTCCCAAGTCTCTGGGGAAGTTACCAGTGACGGTTAGCTTCGATCTCCGAAACAACGATCTCAGCGGCGAGATTCCTCAAACGGGGTCGTTTTCAAACCAGGGACCCACCGCGTTCCTCAACAACCCAAACCTATGCGGGTTCCCTCTGCAAAAACAGTGCACCGGTTCAGCGCCGAGTGAACCGGGTGCGAGTCCCGGTTCGGTCCGTGGACACACGAACCGGTCCAATAAAGGGCTTAGTCCCGGTTTGATCGTTCTGATATCAGTGGCTGATGCTGCTGGGGTGGCTTTGATTGGTCTTGTGATTGTGTATGTTTATTGGAAGAATAAAGACAAATCCAATGGGTGTAGTTGCACTGGGAAAACCAAGCTTGGCGATCTGAACAATGAGAAATCAAGGTTATTTTGTTGTTGTTATCGTTGTGGTTCTTCTTCTTTGGGATGCATGAATGGGTTCAAGAGTGATGATTCTGAGGTGGAGGAAGGTGAGAAAGTAGAGGGTGGTGGGAGAGGAGGGGAAGGGGATTTGGTGGCCATTGATAAAGGTTTCAACTTTGAGCTTGATGAGCTATTGAGGGCCTCTGCATATGTGTTGGGGAAGAGTGGGTTAGGGATTGTGTATAAGGTTGTGCTTGGGAATGGGGTACCTGTGGCTGTGAGGAGATTAGGTGAGGGTGGGGATCAACAGAGATACAAGGAGTTTGTTGCTGAAGTTCAAGCCATTGGTAAAGTCAAGCACCCTAATATTGTGAGGTTGAGAGCTTATTATTGGGCTCCTGATGAGAAGCTTTTGATCAGTGATTTCATCTCCAATGGCAATTTGACCACTGCCCTTAGAGGAAGAAATGGTCAACCATCTCCGAATCTTTCATGGTCAACCAGGCTGAGAATTGCCAAAGGAACAGCTAGGGGTTTGGCCTATCTCCATGAATGCAGTCCAAGAAAATTTGTTCATGGTGACATCAAACCCTCCAACATCCTTCTTGACACAGACTTCCAACCCCTCGTTTCTGATTTTGGTCTTAACCGACTGATCAGCATCACCGGGAACAACCCCTCCTCTGGTGGCTTTATGGGTGGAGCTCTTCCTTACTTTAAGTCATCACAAACAGAGAGAACTAACAACTATAAAGCCCCAGAGGCTCGAGTTCCAGGTTGCAGACCCAATCAGAAATGGGATGTATATTCATTTGGAGTTGTATTACTTGAATTGCTTACTGGCAAGTCCCCAGATTCTTCTCCTGCCGCATCAACTTCTGTTGAAGTCCCTGACTTGGTGAGGTGGGTAAGCAAAGGGTTTGAACAAGAAAGCCCATTATCTGAAATGGTTGATCCATCACTGCTCCAAGAAGTGCGTGCCAAGAAAGAGGTGCTAGCTGTGTTTCATGTAGCACTATCATGCACGGAGGGAGACCCTGAGGTCCGGCCTAGGATGAAAACTGTCTCTGAAAATCTTGAAAGAATTGGAACATAA 2166 0.5157 MSFTFFLLFLLFFFHPVVSLSSDGLALLTLKSAVDGGGASVLSDWNDGDPTPCRWSGISCANISGLPEPRVVGIALSGKGLRGYLPSELGTLLYLRRLNLHTNAFRGSIPSQLFNATALHSIFLHSNNLSGNLPPSVCNLPRLQNLDLSDNSLTGAIPESIRNCSQLQRLILARNKFSGEIPAAPWPDLQSLVQLDLSANLLEGSIPDQIGDLRSLAGSLNLSFNHLTGKLPKSLGKLPVTVSFDLRNNDLSGEIPQTGSFSNQGPTAFLNNPNLCGFPLQKQCTGSAPSEPGASPGSVRGHTNRSNKGLSPGLIVLISVADAAGVALIGLVIVYVYWKNKDKSNGCSCTGKTKLGDLNNEKSRLFCCCYRCGSSSLGCMNGFKSDDSEVEEGEKVEGGGRGGEGDLVAIDKGFNFELDELLRASAYVLGKSGLGIVYKVVLGNGVPVAVRRLGEGGDQQRYKEFVAEVQAIGKVKHPNIVRLRAYYWAPDEKLLISDFISNGNLTTALRGRNGQPSPNLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDTDFQPLVSDFGLNRLISITGNNPSSGGFMGGALPYFKSSQTERTNNYKAPEARVPGCRPNQKWDVYSFGVVLLELLTGKSPDSSPAASTSVEVPDLVRWVSKGFEQESPLSEMVDPSLLQEVRAKKEVLAVFHVALSCTEGDPEVRPRMKTVSENLERIGT 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2234g00032 721 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 20 187 - -
Gabi2234g00032 721 MobiDBLite consensus disorder prediction 286 305 - -
Gabi2234g00032 721 FunFam Leucine-rich repeat receptor-like protein kinase 406 499 - -
Gabi2234g00032 721 SUPERFAMILY L domain-like 23 281 - -
Gabi2234g00032 721 Gene3D Phosphorylase Kinase; domain 1 408 499 - -
Gabi2234g00032 721 Gene3D Ribonuclease Inhibitor 20 185 IPR032675 -
Gabi2234g00032 721 CDD STKc_IRAK 429 719 - -
Gabi2234g00032 721 Gene3D Transferase(Phosphotransferase) domain 1 500 719 - -
Gabi2234g00032 721 Gene3D Ribonuclease Inhibitor 186 286 IPR032675 -
Gabi2234g00032 721 ProSitePatterns Serine/Threonine protein kinases active-site signature. 547 559 IPR008271 GO:0004672|GO:0006468
Gabi2234g00032 721 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 165 719 IPR046959 -
Gabi2234g00032 721 ProSiteProfiles Protein kinase domain profile. 423 719 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2234g00032 721 Pfam Leucine rich repeat 118 177 IPR001611 GO:0005515
Gabi2234g00032 721 SMART LRR_typ_2 189 213 IPR003591 -
Gabi2234g00032 721 SMART LRR_typ_2 92 116 IPR003591 -
Gabi2234g00032 721 SMART LRR_typ_2 140 164 IPR003591 -
Gabi2234g00032 721 FunFam Leucine-rich repeat receptor-like protein kinase 191 286 - -
Gabi2234g00032 721 Pfam Protein kinase domain 428 646 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2234g00032 721 PRINTS Leucine-rich repeat signature 189 202 - -
Gabi2234g00032 721 PRINTS Leucine-rich repeat signature 143 156 - -
Gabi2234g00032 721 SMART serkin_6 427 719 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2234g00032 721 FunFam Os07g0541700 protein 505 586 - -
Gabi2234g00032 721 SUPERFAMILY Protein kinase-like (PK-like) 428 716 IPR011009 -
Gabi2234g00032 721 Pfam Leucine rich repeat N-terminal domain 21 60 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2234g00032 Gabi-Chr2234 265624 270305 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2234g00032 16 719 Receptor kinase-like Gene Family AT1G67510 68.707 0.0 963
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Gabi2234g00032 Pkinase 1.7e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2234g00032 - - gmx:100795021 1163.67