Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2234g00017 ATGGGAAGCTGTTGCAGCCATGATGTTTCGGTTCGAGGCAAGGTGGAAAGCGAGGTGGATGATGTCTCATATGAGTATGATCATGAGAATGATGTCTCATATGAACAAGATGGAGCAATGATAAGGTTAAGAGGTTCCTCTAGGTTTGTGTCAATGTACACCCAACAAGGAAAGAAAGGTGTGAACCAAGATGCAATGGCAGTTTGGGAGGACTTCACTGGAGAAAAAGATACGATCCTTTGTGGGGTGTTTGATGGTCATGGTCCTCTAGGCCACAAGGTTTCACAATTTATTCGTGACAATCTACCCTCAAAACTATCTGCAGCAATCAAAATGTCACAACAGAAGGCCTGCAAATATTATGATGCTAATGATGCAGACACTGATGATGCCTATGATGAGAATTACAACAACATGTCCCTTGCTTCATGGGAGGCATGCTTTCTGAAGACCTTTGATGAGATGGATGATCACCTTGCTCAAGAAATTAACACTGACAGCTATTGCAGTGGTTGCACTGCTGTTACTTTAATTAAACAGGGTGACCAGCTTATAGTTGGAAATTTGGGTGATTCTCGTGCTGTTCTTTGCACAAGGGAAGGAAACCAACTTATTCCTGTTCAACTTACTGTGGACTTGAAACCAGATATTCCAAGTGAAGCTTCAAGAATCATTAACTGTGAAGGCAGAGTTTTCGCAGCCGAAGAAGAACCAGATGTATACAGATTATGGATGCCTGATGAAGACTGCCCTGGACTAGCTATGTCAAGAGCCTTTGGAGACTTTTGCCTGAAAGATTATGGCCTCATCTCAGCTCCTGATGTATTTTATAGAAAACTTTCCAATCAAGATGAATTTGTGGTTTTGGCAACTGATGGGGTTTGGGATGTGCTTACTAACAATGAAGTAATAAATATAGTTGCTTCAGCACCAAGGAGATCAATGGCAGCCAAATTGTTAGTAAAGCGTGCTGTCAAAGCCTGGAAATACAAGTATCCTGGTTCCAAGATTGATGATTGTGCAGTCATATGCTTGTTTCTGGATGATCAACCTGTTTTATCCCATTCTCAATCCAGTATGAGCAGAAGAAATAGACATCACAGCAAGCGCTTGCATATCTCTAAATCCACTAGAAATGAAGACACTGAAACTGTGGATGGCAAGGTTGGGGTAGATCTCAATGAAGAATGGACAGCACTTGGAGGGTTAGCTAGAGCCAACTCTATATCAAAACTTCCACGGCTTGCTAGGAATATGAGTAGAAGGCAATCATCTAAGTACCTTAAAGGGAGTTAA 1296 0.4174 MGSCCSHDVSVRGKVESEVDDVSYEYDHENDVSYEQDGAMIRLRGSSRFVSMYTQQGKKGVNQDAMAVWEDFTGEKDTILCGVFDGHGPLGHKVSQFIRDNLPSKLSAAIKMSQQKACKYYDANDADTDDAYDENYNNMSLASWEACFLKTFDEMDDHLAQEINTDSYCSGCTAVTLIKQGDQLIVGNLGDSRAVLCTREGNQLIPVQLTVDLKPDIPSEASRIINCEGRVFAAEEEPDVYRLWMPDEDCPGLAMSRAFGDFCLKDYGLISAPDVFYRKLSNQDEFVVLATDGVWDVLTNNEVINIVASAPRRSMAAKLLVKRAVKAWKYKYPGSKIDDCAVICLFLDDQPVLSHSQSSMSRRNRHHSKRLHISKSTRNEDTETVDGKVGVDLNEEWTALGGLARANSISKLPRLARNMSRRQSSKYLKGS 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2234g00017 431 Gene3D - 41 349 IPR036457 -
Gabi2234g00017 431 ProSiteProfiles PPM-type phosphatase domain profile. 49 347 IPR001932 -
Gabi2234g00017 431 SMART PP2C_4 40 345 IPR001932 -
Gabi2234g00017 431 SUPERFAMILY PP2C-like 43 349 IPR036457 -
Gabi2234g00017 431 CDD PP2Cc 48 347 IPR001932 -
Gabi2234g00017 431 Pfam Protein phosphatase 2C 74 325 IPR001932 -
Gabi2234g00017 431 PANTHER PROTEIN PHOSPHATASE 47 345 IPR015655 GO:0004722|GO:0006470
Gabi2234g00017 431 MobiDBLite consensus disorder prediction 356 387 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2234g00017 Gabi-Chr2234 131855 134910 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2234g00017 1 351 PP2C-type Phosphatase Gene Family AT5G01700 54.749 1.02e-136 395
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2234g00017 - - gmx:100783603 722.62