Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2234g00009 ATGAGGACATCTTTCACTGACCTTCTTTCCAACCATAACAACAGCAACAACAACAGTAACATGACCATGGATGATGATTACTGGGAAACTAGTGAACTTAAAACTGATCATCAAGTTGGACTTGATGTTGTTCCCAAATTCAAGTCTGTTCAACCTCCCTCACTGCCCCTCTCTCCCTCACCAATTTCCCCTTCTTCTTACTTTGCTTTTACTTCTGCTCTCAGCCCAACTGAGTTCTTGAACTCTTCTTTGTTTCTTTCTTCTCCAAATATTTTTGCATCTCCTACTACTGAGGCTTTTGCTGGCCAGTGCTTGAACTGGAGGAACAGTTCAGGTGAAGACCAACAACATGACAAGGAGTATGAGAAAAACTACTCTGACTTCTCTTTCCAAACCCAAACAAAGCCTGCATCTGTCCTTCAATCTTCTACAAGCATGTTTGAAGTGCAGGAACCACTTAAGAAACAAGACATATGGAAATTCAATGAACCTAAGAAGCAAACTGATTTTTCATCTGAGAGGACAGCTACAAAATCTGAATACCCTTCAACTCACAGCTTTTCCTCAGAAATGGCATCAAGCAAACCAGAAATACAAAGTAATTCAGTTACTGGGTCTGGTTATTTTAACTACACTAATGCATCTCAGTCTGTTAGAGAACAGAAGAGAACAGAAGATGGGTACAATTGGAGAAAATATGGACAGAAACAAGTGAAAGGAAGTGAAAATCCACGCAGTTATTACAAGTGCACACATCAAAATTGCTCAATGAAGAAGAAAGTTGAAAGGTCTTTGGATGGACAAATTACTGAAATAGTATATAAAGGCAGTCATAACCATCCCAAACCCCAGTCTACTAGAAGAACTAGCTCTCAACCAATTCATCAACCTTCTTCATCCTGCACCAACTCAGGGATTTCTGATCAATCAGTGGTGACCCTAGGCAATCCACAAATGGAGCCTGTCTCCATACAAGAAGATTCTTCAGCCTCAGTGGGAGAGGAAAGCTTTGAGCAAACATCACAAACCAGTTATTCTGGAGGAGATGAAGATGACCTTGGACCTGAGGCCAAAAGATGGAAGGGAGAGAATGGAAATGATGGCTATTCTATCTCAGGGAGTAGAACTGTTAGGGAACCTAGAGTTGTTGTTCAAACCACAAGCGAAATTGATATACTTGATGATGGCTTTAGGTGGAGAAAATATGGACAGAAAGTAGTTAAAGGAAATCCAAATGCAAGAAGCTATTACAAATGCACAGCCCCTGGTTGTTCAGTGAGGAAACATGTTGAGCGAGCTGCACATGATATCAAAGCTGTAATCACAACTTATGAAGGGAAACACAACCATGATATACCTGCAGCACGTGGGAGTGCAAGTTATAACATGAACAGAATTTCTCTGAATAGCAACACTAGCAATGTACCAGCACCTATAAGGCCTTCAGCGGTGAACCATTATTCTAGCACATCAAGTTTCACAAACTCACTTTACAATGGCATGCTTCCAACAACTGGAAGTCAAGAATCATTTCCATTGGACATGTTGCAGAGCCCTGGAAGTTTTGGTTATTCTGCTCTTGGTAGATCAATGGGTTCATATACCAATCATGAACAATAA 1620 0.4068 MRTSFTDLLSNHNNSNNNSNMTMDDDYWETSELKTDHQVGLDVVPKFKSVQPPSLPLSPSPISPSSYFAFTSALSPTEFLNSSLFLSSPNIFASPTTEAFAGQCLNWRNSSGEDQQHDKEYEKNYSDFSFQTQTKPASVLQSSTSMFEVQEPLKKQDIWKFNEPKKQTDFSSERTATKSEYPSTHSFSSEMASSKPEIQSNSVTGSGYFNYTNASQSVREQKRTEDGYNWRKYGQKQVKGSENPRSYYKCTHQNCSMKKKVERSLDGQITEIVYKGSHNHPKPQSTRRTSSQPIHQPSSSCTNSGISDQSVVTLGNPQMEPVSIQEDSSASVGEESFEQTSQTSYSGGDEDDLGPEAKRWKGENGNDGYSISGSRTVREPRVVVQTTSEIDILDDGFRWRKYGQKVVKGNPNARSYYKCTAPGCSVRKHVERAAHDIKAVITTYEGKHNHDIPAARGSASYNMNRISLNSNTSNVPAPIRPSAVNHYSSTSSFTNSLYNGMLPTTGSQESFPLDMLQSPGSFGYSALGRSMGSYTNHEQ 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2234g00009 539 FunFam WRKY transcription factor 33 380 446 - -
Gabi2234g00009 539 MobiDBLite consensus disorder prediction 174 200 - -
Gabi2234g00009 539 SMART WRKY_cls 224 282 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi2234g00009 539 SMART WRKY_cls 393 452 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi2234g00009 539 MobiDBLite consensus disorder prediction 279 348 - -
Gabi2234g00009 539 ProSiteProfiles WRKY domain profile. 388 453 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi2234g00009 539 Pfam WRKY DNA -binding domain 394 450 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi2234g00009 539 Pfam WRKY DNA -binding domain 225 281 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi2234g00009 539 MobiDBLite consensus disorder prediction 1 21 - -
Gabi2234g00009 539 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 127 474 IPR044810 GO:0003700
Gabi2234g00009 539 MobiDBLite consensus disorder prediction 164 200 - -
Gabi2234g00009 539 SUPERFAMILY WRKY DNA-binding domain 385 453 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi2234g00009 539 Gene3D WRKY domain 210 284 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi2234g00009 539 SUPERFAMILY WRKY DNA-binding domain 220 283 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi2234g00009 539 ProSiteProfiles WRKY domain profile. 219 283 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi2234g00009 539 MobiDBLite consensus disorder prediction 274 373 - -
Gabi2234g00009 539 Gene3D WRKY domain 380 446 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi2234g00009 539 FunFam WRKY transcription factor 213 284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2234g00009 Gabi-Chr2234 62164 64826 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2234g00009 44 525 WRKY Transcription Factor Family AT2G38470 46.154 1.93e-110 337
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gabi2234g00009 WRKY 1.1e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2234g00009 K13424 - gmx:100792833 791.956