Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gabi2229g00007 | ATGGCACTCAATAATATCACTTGGTGCCCATTCATATTCATCCTCTTATTATTATTATTATTATATGTTATTCCCTCTTATGCTAATGGTGCTTCAGACACAGAATCCCTCCTCAAATTTAAGGAGTCCCTCCAAAACAACAATGCATTATCATCATGGAATGCATCATCAATCCCTCCATGTTCAGGTGATGCTGCCAATTGGTATGGCATTCTGTGCTATAAAGGACATACATGGGGTTTGAGGCTTGAGAATATGGGCCTCAAGGGAGTCATTGATGTTGACTCCCTCAAGGAGTTACCATATCTCAGAACCATAAGCTTCATTAACAATGATTTTGATAGCACATGGCCAGAGCTACACAAGCTAGTTGGTTTGAAGACCATTTACCTTTCAAATAACAAGTTTTCAGGGGAGGTTCCTGCTCAAGCTTTTGAGGGTATGCAATGGTTGAAGAAAATTCATTTGTCAAATAATCACTTTACAGGTGCTATTCCAACTTCTTTAGCATCCTTGCCTAGGCTTATAGACTTGAGGTTGGACGGCAACAAATTCAGTGGCACCATTCCCAATTTTCAGCAAATGTTGAAATCATTTACCGTAGCTAATAATCAATTAGAGGGAGAAATACCAGCCAGCCTTAGCAAGATGCTCGCTTCATCTTTTTCAGGTAATGAAAAGCTATGTGGAGCCCCGTTAGGTGCATGCTCCTCTAATAAGAAGAAATCAACAGTCAGTGTTGTTGTGGTTGCGGTTCTTGTTAGTGTGGCATTGATTGTGATAATTGGAGCATTGATATTATTAGTCCTCCGTCGAAGAAGAAAACAAGCACCAACAGTGACTAGGGAAAACTCACCATCTAGCCTTGAAAAGAAAGTAGGAGCAATGGAATCATCAGATGAAGGGAGCCATAGGTCTACAAGGTCTTCAAGGTCCCAAGGTTCTAACAACAGCATGAAGTTGTCCTTCGTGAGGGATGACAGAGATCAGTTTGATTTGCAAGAACTGCTGAGAGCCTCTGCTGAGATATTGGGTAGTGGTTGTTACAGTTCTTCCTACAAGGCTGGTTTGTTAAATGGCCCAACCATGGTGGTGAAGAGATTCAAACAAATGAACAATGTAGGGAGGGAAGAGTTTCAGGAACACATGAGAAGGTTAGGAAGGTTGAATCATCCTAATCTGCTTCCTCTCGTTGCTTACTACTACAGAAAGGAAGAGAAGCTCTTGGTCACCGACTATGTTCAGAATGGCAGCTTGGCTGTTCGCCTACATGGATACCATGCTGTGGGGCAACCAAGCCTTGATTGGCCAACGAGGTTGAAGATTGTGAAAGGAATAGCAAAAGGTGTTGAATATCTGTACAAGGAGTTGCCAAGCATAATAGCACCACATGGACATCTTAAATCCTCCAACGTTCTTCTGAATGAGTCTTTGGAACCGATACTCACAGATTATGGGTTGGTACCAGTTATAAATCAGGATCTTGCACCTGAAATCATGGTGAGCTACAAGTCCCCAGAGTATTTGCAACATGGCCGTATAACAAAGAAGACAGATGTTTGGAGTCTTGGGATACTCATTTTGGAGATTCTTACAGGCAAGTTACCAACTAACTTTCTACAACAAGGTAAAGGAAGTGAGTTGAGTATGGCAAATTGGGTGGACTCTGTTGTCCCTGAAGAGTGGACTTCTGAGGTGTTTGATAAAGACATGGAGGTAACCAAAAACAATGAGGGGGAGATGGTCAAGCTTTTGAAGATTGCATTGGCTTCTTGTGAACTTGATATAGACAAGAGATGGGATTTGAAAGAAGCTGTAGAAAATATTCTAGAGGTTAAGGAAAGGGATCATAATGATCAAGAGGATTTCTATTCTTCTTAA | 1881 | 0.4141 | MALNNITWCPFIFILLLLLLLYVIPSYANGASDTESLLKFKESLQNNNALSSWNASSIPPCSGDAANWYGILCYKGHTWGLRLENMGLKGVIDVDSLKELPYLRTISFINNDFDSTWPELHKLVGLKTIYLSNNKFSGEVPAQAFEGMQWLKKIHLSNNHFTGAIPTSLASLPRLIDLRLDGNKFSGTIPNFQQMLKSFTVANNQLEGEIPASLSKMLASSFSGNEKLCGAPLGACSSNKKKSTVSVVVVAVLVSVALIVIIGALILLVLRRRRKQAPTVTRENSPSSLEKKVGAMESSDEGSHRSTRSSRSQGSNNSMKLSFVRDDRDQFDLQELLRASAEILGSGCYSSSYKAGLLNGPTMVVKRFKQMNNVGREEFQEHMRRLGRLNHPNLLPLVAYYYRKEEKLLVTDYVQNGSLAVRLHGYHAVGQPSLDWPTRLKIVKGIAKGVEYLYKELPSIIAPHGHLKSSNVLLNESLEPILTDYGLVPVINQDLAPEIMVSYKSPEYLQHGRITKKTDVWSLGILILEILTGKLPTNFLQQGKGSELSMANWVDSVVPEEWTSEVFDKDMEVTKNNEGEMVKLLKIALASCELDIDKRWDLKEAVENILEVKERDHNDQEDFYSS | 626 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gabi2229g00007 | 626 | ProSiteProfiles | Protein kinase domain profile. | 338 | 624 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gabi2229g00007 | 626 | Gene3D | Ribonuclease Inhibitor | 196 | 236 | IPR032675 | - | |
Gabi2229g00007 | 626 | FunFam | Pollen receptor-like kinase 1 | 414 | 623 | - | - | |
Gabi2229g00007 | 626 | Pfam | Leucine rich repeat N-terminal domain | 32 | 73 | IPR013210 | - | |
Gabi2229g00007 | 626 | Gene3D | Phosphorylase Kinase; domain 1 | 302 | 413 | - | - | |
Gabi2229g00007 | 626 | Pfam | Protein kinase domain | 341 | 607 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gabi2229g00007 | 626 | PANTHER | LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 | 16 | 616 | IPR046959 | - | |
Gabi2229g00007 | 626 | SUPERFAMILY | L domain-like | 36 | 232 | - | - | |
Gabi2229g00007 | 626 | SUPERFAMILY | Protein kinase-like (PK-like) | 342 | 610 | IPR011009 | - | |
Gabi2229g00007 | 626 | FunFam | pollen receptor-like kinase 1 | 307 | 413 | - | - | |
Gabi2229g00007 | 626 | Gene3D | Ribonuclease Inhibitor | 30 | 195 | IPR032675 | - | |
Gabi2229g00007 | 626 | Gene3D | Transferase(Phosphotransferase) domain 1 | 414 | 624 | - | - | |
Gabi2229g00007 | 626 | MobiDBLite | consensus disorder prediction | 277 | 319 | - | - | |
Gabi2229g00007 | 626 | Pfam | Leucine rich repeat | 125 | 185 | IPR001611 | GO:0005515 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gabi2229g00007 | Gabi-Chr2229 | 116648 | 120002 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gabi2229g00007 | 15 | 626 | Receptor kinase-like Gene Family | AT5G35390 | 53.061 | 0.0 | 658 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-III | Gabi2229g00007 | Pkinase | 2.1e-29 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gabi2229g00007 | - | - | gmx:100804368 | 843.958 |