Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2229g00007 ATGGCACTCAATAATATCACTTGGTGCCCATTCATATTCATCCTCTTATTATTATTATTATTATATGTTATTCCCTCTTATGCTAATGGTGCTTCAGACACAGAATCCCTCCTCAAATTTAAGGAGTCCCTCCAAAACAACAATGCATTATCATCATGGAATGCATCATCAATCCCTCCATGTTCAGGTGATGCTGCCAATTGGTATGGCATTCTGTGCTATAAAGGACATACATGGGGTTTGAGGCTTGAGAATATGGGCCTCAAGGGAGTCATTGATGTTGACTCCCTCAAGGAGTTACCATATCTCAGAACCATAAGCTTCATTAACAATGATTTTGATAGCACATGGCCAGAGCTACACAAGCTAGTTGGTTTGAAGACCATTTACCTTTCAAATAACAAGTTTTCAGGGGAGGTTCCTGCTCAAGCTTTTGAGGGTATGCAATGGTTGAAGAAAATTCATTTGTCAAATAATCACTTTACAGGTGCTATTCCAACTTCTTTAGCATCCTTGCCTAGGCTTATAGACTTGAGGTTGGACGGCAACAAATTCAGTGGCACCATTCCCAATTTTCAGCAAATGTTGAAATCATTTACCGTAGCTAATAATCAATTAGAGGGAGAAATACCAGCCAGCCTTAGCAAGATGCTCGCTTCATCTTTTTCAGGTAATGAAAAGCTATGTGGAGCCCCGTTAGGTGCATGCTCCTCTAATAAGAAGAAATCAACAGTCAGTGTTGTTGTGGTTGCGGTTCTTGTTAGTGTGGCATTGATTGTGATAATTGGAGCATTGATATTATTAGTCCTCCGTCGAAGAAGAAAACAAGCACCAACAGTGACTAGGGAAAACTCACCATCTAGCCTTGAAAAGAAAGTAGGAGCAATGGAATCATCAGATGAAGGGAGCCATAGGTCTACAAGGTCTTCAAGGTCCCAAGGTTCTAACAACAGCATGAAGTTGTCCTTCGTGAGGGATGACAGAGATCAGTTTGATTTGCAAGAACTGCTGAGAGCCTCTGCTGAGATATTGGGTAGTGGTTGTTACAGTTCTTCCTACAAGGCTGGTTTGTTAAATGGCCCAACCATGGTGGTGAAGAGATTCAAACAAATGAACAATGTAGGGAGGGAAGAGTTTCAGGAACACATGAGAAGGTTAGGAAGGTTGAATCATCCTAATCTGCTTCCTCTCGTTGCTTACTACTACAGAAAGGAAGAGAAGCTCTTGGTCACCGACTATGTTCAGAATGGCAGCTTGGCTGTTCGCCTACATGGATACCATGCTGTGGGGCAACCAAGCCTTGATTGGCCAACGAGGTTGAAGATTGTGAAAGGAATAGCAAAAGGTGTTGAATATCTGTACAAGGAGTTGCCAAGCATAATAGCACCACATGGACATCTTAAATCCTCCAACGTTCTTCTGAATGAGTCTTTGGAACCGATACTCACAGATTATGGGTTGGTACCAGTTATAAATCAGGATCTTGCACCTGAAATCATGGTGAGCTACAAGTCCCCAGAGTATTTGCAACATGGCCGTATAACAAAGAAGACAGATGTTTGGAGTCTTGGGATACTCATTTTGGAGATTCTTACAGGCAAGTTACCAACTAACTTTCTACAACAAGGTAAAGGAAGTGAGTTGAGTATGGCAAATTGGGTGGACTCTGTTGTCCCTGAAGAGTGGACTTCTGAGGTGTTTGATAAAGACATGGAGGTAACCAAAAACAATGAGGGGGAGATGGTCAAGCTTTTGAAGATTGCATTGGCTTCTTGTGAACTTGATATAGACAAGAGATGGGATTTGAAAGAAGCTGTAGAAAATATTCTAGAGGTTAAGGAAAGGGATCATAATGATCAAGAGGATTTCTATTCTTCTTAA 1881 0.4141 MALNNITWCPFIFILLLLLLLYVIPSYANGASDTESLLKFKESLQNNNALSSWNASSIPPCSGDAANWYGILCYKGHTWGLRLENMGLKGVIDVDSLKELPYLRTISFINNDFDSTWPELHKLVGLKTIYLSNNKFSGEVPAQAFEGMQWLKKIHLSNNHFTGAIPTSLASLPRLIDLRLDGNKFSGTIPNFQQMLKSFTVANNQLEGEIPASLSKMLASSFSGNEKLCGAPLGACSSNKKKSTVSVVVVAVLVSVALIVIIGALILLVLRRRRKQAPTVTRENSPSSLEKKVGAMESSDEGSHRSTRSSRSQGSNNSMKLSFVRDDRDQFDLQELLRASAEILGSGCYSSSYKAGLLNGPTMVVKRFKQMNNVGREEFQEHMRRLGRLNHPNLLPLVAYYYRKEEKLLVTDYVQNGSLAVRLHGYHAVGQPSLDWPTRLKIVKGIAKGVEYLYKELPSIIAPHGHLKSSNVLLNESLEPILTDYGLVPVINQDLAPEIMVSYKSPEYLQHGRITKKTDVWSLGILILEILTGKLPTNFLQQGKGSELSMANWVDSVVPEEWTSEVFDKDMEVTKNNEGEMVKLLKIALASCELDIDKRWDLKEAVENILEVKERDHNDQEDFYSS 626
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Gabi2229g00007 626 ProSiteProfiles Protein kinase domain profile. 338 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2229g00007 626 Gene3D Ribonuclease Inhibitor 196 236 IPR032675 -
Gabi2229g00007 626 FunFam Pollen receptor-like kinase 1 414 623 - -
Gabi2229g00007 626 Pfam Leucine rich repeat N-terminal domain 32 73 IPR013210 -
Gabi2229g00007 626 Gene3D Phosphorylase Kinase; domain 1 302 413 - -
Gabi2229g00007 626 Pfam Protein kinase domain 341 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2229g00007 626 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 16 616 IPR046959 -
Gabi2229g00007 626 SUPERFAMILY L domain-like 36 232 - -
Gabi2229g00007 626 SUPERFAMILY Protein kinase-like (PK-like) 342 610 IPR011009 -
Gabi2229g00007 626 FunFam pollen receptor-like kinase 1 307 413 - -
Gabi2229g00007 626 Gene3D Ribonuclease Inhibitor 30 195 IPR032675 -
Gabi2229g00007 626 Gene3D Transferase(Phosphotransferase) domain 1 414 624 - -
Gabi2229g00007 626 MobiDBLite consensus disorder prediction 277 319 - -
Gabi2229g00007 626 Pfam Leucine rich repeat 125 185 IPR001611 GO:0005515
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Gabi2229g00007 Gabi-Chr2229 116648 120002 Dispersed/Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2229g00007 15 626 Receptor kinase-like Gene Family AT5G35390 53.061 0.0 658
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Gabi2229g00007 Pkinase 2.1e-29 CL0016
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2229g00007 - - gmx:100804368 843.958