Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2229g00002 ATGAACTTTGCCTACTTTGGTAGAAAGCTTGAGCATCTTCATACTTTTTTCCTCAATCACTACAACTTCCGTGGATTCTTGTCTCGTCTTCACTCCTTCCATTTCAACTCCTTCTTCATTCAACTTTTTTATTTCGTTATCCTTTCTCTCTTTGGTTACCTTGGTCTCAAGTTCTTTAAGCCTAGAACTCCTGTTAGGCTCAATGACTTGGATCTCCTTTACACCTCTGTTTCTGCTTCCACAGTTTCTAGCATGGCAGCCTTAGAAATGGAGGTGTTCTCCAATTCTCAACTCATTCTCTTGACCCTTCTTATGTTATTTGGTGGTGAAGTTTTTACTTCCATGCTCGAACTTGTATTTCATAAGTTCGATTTCACCGAAAATCAGAGTGTCAAAAACAGAGTGTCAATTAATAATGCAAATCAAATTGAGCTTGGTTTAGTTCCTATTCGTCAGTCAGAAAATCACAAACGGAGTGATAGTAATAATAATGTTCCAAATGGCACAGTTGCATCCTTCAACGATACAAATAGGCTTCTTAGGTATAACTCTCGTAGGTATCTAAAATATGTAGTTTTAGTTTACCTTATGGTGGTTCATTTTCTTGGTTCGAGTTTGGTCTCTTTGTACCTAAGCTTTATACCGAGCGCGAGAATGGTACTGAAAAACAAAGGCATCAAAATACCAACATTTTCTTTCTTTACCGTAGTTTCCACTTTTGCCAATTGCGGTTTTATCCCTACCAATGAGAACATGATAGTTTTCAAGAAGAATTCAGGCCTCCTACTACTTATTCTCCCACATATCTTTCTTGGTAACACCCTCTACCCTCCATGTTTGATGCTTGTGATAAAGGTTCTGAAAAAAGTTACAAGAAGAGAGGAATTCTCGTACATGCTGAAGAATTCCAAAGAGATAGGTTATGACCATTTGCTCTCAGCTTTTCATTGTTGGCATCTGGTTGCTACTGTCTTGGGGTTCAATCTGATACAATTTGTAACGTTCTGCTCTATGGAGTGGAACTCCAAAAATATGGAGGGTCTTGATCTCTATCAGAAACTGGTTGCATCTTTGTTTCAAGTTACAAACGTGAGACATGCTGGTGAATCTGTTTTCGATCTCTCCACCATGTCTTCAGCCATATTGGTGCTCTTCGTAGTCATGATGTACCTCCCACCATACACTACTCTTTTACCTATAACCGACCACGAAAATGAAGCCAAGAGAGACAAAAAAAGCCTGACGGATTGTCTTGTATTCTCTCAACTCTCATGTTTGGTTATATTCATTATTATGATATGCATCACTGAGAACAAAAGCATAAGAGACGATCCACTCAATTTTAATGTGCTCAACATCACCGTAGAAGTGATCAGTGCGTATGGGAATGTTGGGTTAACAACGGGATGCAGTTGTGCAAGGCAATTGAAACCCAATGGCAAGTGTAAAGATGCATGGGTTGGATTTTCGGGCAGGTGGAGTATCAAGGGCAAGTTCATCCTTATTTTGGCCATGTTGTTTGGGAGGCTAAAGAAATTCAACATGAAAGGTGGCAAAGCCTGGCACCTATACTAG 1575 0.3949 MNFAYFGRKLEHLHTFFLNHYNFRGFLSRLHSFHFNSFFIQLFYFVILSLFGYLGLKFFKPRTPVRLNDLDLLYTSVSASTVSSMAALEMEVFSNSQLILLTLLMLFGGEVFTSMLELVFHKFDFTENQSVKNRVSINNANQIELGLVPIRQSENHKRSDSNNNVPNGTVASFNDTNRLLRYNSRRYLKYVVLVYLMVVHFLGSSLVSLYLSFIPSARMVLKNKGIKIPTFSFFTVVSTFANCGFIPTNENMIVFKKNSGLLLLILPHIFLGNTLYPPCLMLVIKVLKKVTRREEFSYMLKNSKEIGYDHLLSAFHCWHLVATVLGFNLIQFVTFCSMEWNSKNMEGLDLYQKLVASLFQVTNVRHAGESVFDLSTMSSAILVLFVVMMYLPPYTTLLPITDHENEAKRDKKSLTDCLVFSQLSCLVIFIIMICITENKSIRDDPLNFNVLNITVEVISAYGNVGLTTGCSCARQLKPNGKCKDAWVGFSGRWSIKGKFILILAMLFGRLKKFNMKGGKAWHLY 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2229g00002 524 PANTHER POTASSIUM TRANSPORT PROTEIN DDB_G0292412-RELATED 29 524 - -
Gabi2229g00002 524 Pfam Cation transport protein 188 391 IPR003445 GO:0006812|GO:0008324|GO:0055085
Gabi2229g00002 524 Pfam Cation transport protein 407 482 IPR003445 GO:0006812|GO:0008324|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2229g00002 Gabi-Chr2229 46181 51591 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2229g00002 57 524 Inorganic Solute Cotransporters AT4G10310 50.000 4.33e-154 448
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2229g00002 K24976 - gmx:100779582 695.656