Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2228g00031 ATGGCATCCTCCAAGGAACGTGAAAACTTCGTCTACGTCGCTAAGCTCGCTGAACAAGCCGAGCGTTATGAAGAAATGGTGGATGCGATGAAAAGTGTGGCTAAGCTGAATGTTGAATTAACTGTTGAAGAGCGAAACCTTCTGTCGGTTGGGTACAAGAATATAGTAGGTGCTCGCAGGGCATCGTGGAGGATCCTGTCCTCAATTGAACAGAAGGAGGAAGCTAAAGGAAACGATCTGAGTGTGAAGCGGATTAAGGACTATAGGAAAAAAGTGGAATCGGAGTTATCCAATATCTGCATCGATATCATGGATATTATTGATAACCATCTGATTCCCCAGTCCTCCGGTGAATCCAATGTCTTCTACTATAAAATGAAAGGTGACTATTACCGCTATCTGGCTGAATTTAAGGCTGGTGACGAGAGAAAAGAGGCTGCTGATCAGTCCTTGAAAGCATATGAGGCAGCTTCCACTGCAGCAGAGGCTGATTTACCTCCCACACATCCCATCAGACTGGGTTTGGCTTTGAACTTCTCTGTCTTTTATTATGAAATTTTGAACTCTCCTGAAAGGGCTTGTCACCTTGCCAAGCAGGCATTTGATGTAGCAATCTCTGAGTTGGATACTCTGAGTGAGGAATCTTACAAAGACAGCACACTCATTATGCAGCTTCTGAGGGATAACCTCACCTTGTGGACTTCTGACATCCCTGAAGATGGAGCTGAAGAACAAAAGGGGGATTCTGCCCGAGCTGCTGGAGGTGATGATGCAGAGTAA 780 0.4526 MASSKERENFVYVAKLAEQAERYEEMVDAMKSVAKLNVELTVEERNLLSVGYKNIVGARRASWRILSSIEQKEEAKGNDLSVKRIKDYRKKVESELSNICIDIMDIIDNHLIPQSSGESNVFYYKMKGDYYRYLAEFKAGDERKEAADQSLKAYEAASTAAEADLPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDVAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGAEEQKGDSARAAGGDDAE 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2228g00031 259 PRINTS 14-3-3 protein zeta signature 39 68 IPR000308 -
Gabi2228g00031 259 PRINTS 14-3-3 protein zeta signature 180 206 IPR000308 -
Gabi2228g00031 259 PRINTS 14-3-3 protein zeta signature 118 140 IPR000308 -
Gabi2228g00031 259 PRINTS 14-3-3 protein zeta signature 88 112 IPR000308 -
Gabi2228g00031 259 PRINTS 14-3-3 protein zeta signature 153 179 IPR000308 -
Gabi2228g00031 259 PRINTS 14-3-3 protein zeta signature 207 236 IPR000308 -
Gabi2228g00031 259 ProSitePatterns 14-3-3 proteins signature 1. 45 55 IPR023409 -
Gabi2228g00031 259 Pfam 14-3-3 protein 14 234 IPR023410 -
Gabi2228g00031 259 Gene3D - 1 247 IPR036815 -
Gabi2228g00031 259 SMART 1433_4 7 247 IPR023410 -
Gabi2228g00031 259 FunFam 14-3-3 protein epsilon 2 247 - -
Gabi2228g00031 259 Coils Coil 13 33 - -
Gabi2228g00031 259 PIRSF 14-3-3 1 246 IPR000308 -
Gabi2228g00031 259 MobiDBLite consensus disorder prediction 236 259 - -
Gabi2228g00031 259 MobiDBLite consensus disorder prediction 239 259 - -
Gabi2228g00031 259 ProSitePatterns 14-3-3 proteins signature 2. 216 235 IPR023409 -
Gabi2228g00031 259 SUPERFAMILY 14-3-3 protein 6 236 IPR036815 -
Gabi2228g00031 259 PANTHER 14-3-3 PROTEIN 7 237 IPR000308 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2228g00031 Gabi-Chr2228 263323 267216 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2228g00031 1 259 14-3-3 family AT2G42590 79.468 1.55e-155 432
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2228g00031 K06630 - gmx:100807980 424.861