Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2225g00001 ATGAAAGAAATGTCAGCAACGACATACGATACTGATGATGTCTCTGTTTCTTTAACCAAGAAGAGGAAGATTTATGAAGAAACTCATGTTGCTGCAAGAAAGAAGGTGTGTGTAGAGAGAAGTTGGGGTTACTCTTTGGATTTGATGCTTTATGATGACCCTTGGAAGATCAAGAAAGTCCTTAATGGCAGTGATCTTGGCAACATGAGCAGGCTCTTGCTCCCTAAAGATTTTGCTGAGAATTTGGTGGTGCCGGTGTTGGATGGAGACGTTGAAAGAGGTGTTCAAGTTGAGATTTGGGATGTAGACACTGCCTCCATTCATTCTTTAATTTTCAAGAAATGGGTTTCTTCAAGAAGCTATGTTTTCATTGGAAATTGGGTTAAAGATTTTGTATCAAGGAGAGGCTTAAAGAAAGGGGATGAGATTGGCCTTCATTGGGATCCATACAAAAATCGCTTTAATTTTTCTGTTCTTGATGCCTTTTACGATTGA 495 0.3919 MKEMSATTYDTDDVSVSLTKKRKIYEETHVAARKKVCVERSWGYSLDLMLYDDPWKIKKVLNGSDLGNMSRLLLPKDFAENLVVPVLDGDVERGVQVEIWDVDTASIHSLIFKKWVSSRSYVFIGNWVKDFVSRRGLKKGDEIGLHWDPYKNRFNFSVLDAFYD 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2225g00001 164 Gene3D - 54 158 IPR015300 -
Gabi2225g00001 164 CDD B3_DNA 55 160 IPR003340 GO:0003677
Gabi2225g00001 164 SUPERFAMILY DNA-binding pseudobarrel domain 53 157 IPR015300 -
Gabi2225g00001 164 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 33 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2225g00001 Gabi-Chr2225 11792 12286 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2225g00001 33 148 B3 DNA Binding Superfamily AT3G24650 29.310 7.24e-10 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2225g00001 - - lang:109331497 190.274