Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2222g00014 ATGGGGGGCAAATGTCCGCACAGACACGTGAAGAAAAGAAGATATTCTCACAAGACTGCTCGCCGTACCAAATTCCTCTACAAAGGGGATGACATGGTTTATGCGCAGCTAAATCAGCTTGATGAAGATAAGAGCACCTTACCTGTAGATGAAGATTTGCCTGGGATGGGCCAGTACTATTGCCTTCACTGCGATCGATACTTTTCCAATGTAGCTGTGAGGGATGAGCATTTTAAGACCAAACGACACAAGAAGCGGTATGATGGCTTTGCTTTTGCTGATATTCTCCCTGCTCCCACCCCCTTTATTTTCTATCCTTCCCAACTTTTTCTGCATTTGCATATTGGTGAATATTG 356 0.4438 MGGKCPHRHVKKRRYSHKTARRTKFLYKGDDMVYAQLNQLDEDKSTLPVDEDLPGMGQYYCLHCDRYFSNVAVRDEHFKTKRHKKRYDGFAFADILPAPTPFIFYPSQLFLHLHIGEY 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2222g00014 118 PANTHER EXPRESSED PROTEIN 1 88 - -
Gabi2222g00014 118 ProSitePatterns Zinc finger C2H2 type domain signature. 61 83 IPR013087 -
Gabi2222g00014 118 SUPERFAMILY beta-beta-alpha zinc fingers 47 88 IPR036236 -
Gabi2222g00014 118 Gene3D Classic Zinc Finger 45 93 - -
Gabi2222g00014 118 SMART ZnF_U1_5 56 90 IPR003604 GO:0003676|GO:0008270
Gabi2222g00014 118 Pfam Zinc-finger double-stranded RNA-binding 58 84 IPR022755 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2222g00014 Gabi-Chr2222 302242 303051 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2222g00014 3 88 C2H2 Transcription Factor Family AT2G36930 68.605 1.67e-39 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2222g00014 K14821 - qsa:O6P43_010258 169.088