Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2222g00010 ATGGGTAATTGTTGCGTAACGCCATCGTCTGGTGGAAACAACAAGAAGGGAAGGAAGAAGCAGAAGCAGAGGGAAAACCAGTTCGAGGATGGGCCGGGGAACAAGCTGGTGGTGCTGAAGAAGCCCACGGGCCGAGAGATCGGGCTCCGCGGCCATTACACCGAGCGCGCCGCCGCCTTCGTCACCAAGACCATCGTTGAAGTTGTGCAAATGTGCCACAAGCATGGTGTGATGCATCGGGATCTTAAACCTGAGAACTTTTTGTTTGGAAGCAAGAAGGAAACAGCACCTCTGAAGGCTATTGACTTTGGATTGTCAGTTTTCTTTAAACCAGGTGAAAGATTTAATGAGATAGTTGGAAGTCCATATTACATGGCTCCTGAGGTATTAAGGCGGAATTATGGCCCTGAAGTAGATATCTGGAGTGCTGGAGTAATTCTTTACATCTTACTTTGTGGTGTCCCGCCATTTTGGGCAGAAACTGAACAGGGAGTTGCCCAAGCAATTATACGATCAGTAGTTGATTTTAAAAGGGAGCCATGGCCAAAGGTTTCAAATAATGCAAAAGACCTTGTGAAGAAGATGCTTGATCCTGACCCAAAGCGCCGGCTTACTGCACAGGAAGTGTTGGATCATCCGTGGTTACAGAATGCAAAGAAAGCTCCTAATGTTTCATTAGGAGAAACTGTTAGAGCAAGGCTCATGCAATTTTCTGTAATGAACAAGCTTAAGAAAAGAGCTTTGAGGGTGATTGCAGAGCATTTGTCAGTAGAAGAAGTTGCTGGAATTAAAGAGGGATTTCAGCTGATGGATACAGGAAATAGAGGCAAGATTAACATTGATGAGCTACGAGAAGGATTGCATAAGCTAGGCCACCAAGTTCCTGAAGGAGATGTCCAAATAATTATGGAAGCTGGTGATTTAGATAAAGATGGGTACCTAGATTATGGAGAGTTTTTAGCCGTTTCTATTCATCTGAGAAAGATGGGCAATGATGAACACCTTCACAAAGCCTTCCAATTTTTTGATCAGAACCAAAGTGGGTATATTGAAATTGAAGAGTTACGTAATGCCTTGGGTGATGAGGTTGATACGAACAGTGAAGAAGTCATTAATGCAATCATGCATGATGTGGACACAGATAAGGATGGAAGAATAAGTTATGAGGAATTTGCTGCAATGATGAAAGCTGGCACAGATTGGAGAAAAGCATCAAGGCAGTATTCGAGAGAGAGGTTTACTAGTCTAAGTCTGAAATTGATGAAGGACGGGTCGTTGGAATCAAACAATGAGAGTAGATGA 1302 0.4347 MGNCCVTPSSGGNNKKGRKKQKQRENQFEDGPGNKLVVLKKPTGREIGLRGHYTERAAAFVTKTIVEVVQMCHKHGVMHRDLKPENFLFGSKKETAPLKAIDFGLSVFFKPGERFNEIVGSPYYMAPEVLRRNYGPEVDIWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVVDFKREPWPKVSNNAKDLVKKMLDPDPKRRLTAQEVLDHPWLQNAKKAPNVSLGETVRARLMQFSVMNKLKKRALRVIAEHLSVEEVAGIKEGFQLMDTGNRGKINIDELREGLHKLGHQVPEGDVQIIMEAGDLDKDGYLDYGEFLAVSIHLRKMGNDEHLHKAFQFFDQNQSGYIEIEELRNALGDEVDTNSEEVINAIMHDVDTDKDGRISYEEFAAMMKAGTDWRKASRQYSRERFTSLSLKLMKDGSLESNNESR 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2222g00010 433 ProSitePatterns EF-hand calcium-binding domain. 343 355 IPR018247 -
Gabi2222g00010 433 SUPERFAMILY Protein kinase-like (PK-like) 50 225 IPR011009 -
Gabi2222g00010 433 FunFam calcium-dependent protein kinase 13 45 223 - -
Gabi2222g00010 433 MobiDBLite consensus disorder prediction 1 34 - -
Gabi2222g00010 433 ProSiteProfiles EF-hand calcium-binding domain profile. 294 329 IPR002048 GO:0005509
Gabi2222g00010 433 SMART serkin_6 10 215 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2222g00010 433 ProSiteProfiles EF-hand calcium-binding domain profile. 258 293 IPR002048 GO:0005509
Gabi2222g00010 433 ProSiteProfiles Protein kinase domain profile. 1 215 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2222g00010 433 SMART efh_1 334 362 IPR002048 GO:0005509
Gabi2222g00010 433 SMART efh_1 262 290 IPR002048 GO:0005509
Gabi2222g00010 433 SMART efh_1 298 326 IPR002048 GO:0005509
Gabi2222g00010 433 SMART efh_1 370 398 IPR002048 GO:0005509
Gabi2222g00010 433 Pfam Protein kinase domain 50 215 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2222g00010 433 SUPERFAMILY EF-hand 244 421 IPR011992 -
Gabi2222g00010 433 ProSiteProfiles EF-hand calcium-binding domain profile. 330 365 IPR002048 GO:0005509
Gabi2222g00010 433 ProSitePatterns Serine/Threonine protein kinases active-site signature. 77 89 IPR008271 GO:0004672|GO:0006468
Gabi2222g00010 433 CDD EFh 334 396 IPR002048 GO:0005509
Gabi2222g00010 433 FunFam Calcium-dependent protein kinase 7 224 399 - -
Gabi2222g00010 433 ProSiteProfiles EF-hand calcium-binding domain profile. 366 401 IPR002048 GO:0005509
Gabi2222g00010 433 ProSitePatterns EF-hand calcium-binding domain. 379 391 IPR018247 -
Gabi2222g00010 433 Gene3D Transferase(Phosphotransferase) domain 1 44 223 - -
Gabi2222g00010 433 PANTHER SERINE/THREONINE-PROTEIN KINASE 28 391 - -
Gabi2222g00010 433 Gene3D - 224 399 - -
Gabi2222g00010 433 Pfam EF-hand domain pair 263 321 IPR002048 GO:0005509
Gabi2222g00010 433 Pfam EF-hand domain pair 333 396 IPR002048 GO:0005509
Gabi2222g00010 433 ProSitePatterns EF-hand calcium-binding domain. 307 319 IPR018247 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2222g00010 Gabi-Chr2222 168793 175101 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2222g00010 1 432 EF-hand Containing Proteins AT5G12480 75.964 0.0 698
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Gabi2222g00010 Pkinase 3.1e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2222g00010 K13412 - tcc:18598981 700.664