Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2217g00002 ATGGCTCTTAAACTTCCCAAAAATTCTTCTCTGACACTTTGTTCCTCTACCATGACCCTTAATCCTGACTCAGCACCACCGCATCCTTCACCGGATTCCGCCACCGTCAACGTCAACGGCGCCGCTACCTCCGAGGAAAACCAACTTGCGCAACCATCATCACCACCACCATCATCATTATCAACATCACCATCACCATCGTTTCCAAGTCCACCGCAAGAACTGCGAGTTCCAATATGGTGGTCAGAAGATGGAAATCTCAGCATCGATTGGATCGAGAATCTGATGGCATGCTTCGATTGGTCTTCGAGGAACCTCCCTCCCTCGGAGTTCCCTTCGGTTCTTCCCGTTCAAGTCTTCGACTCTCTCATCCTCGTCGCTTCCAAGATGCTACACAAGGAACCAAATTGCGTGCCGGTAGACCCCTTTCGCCCTAACTCCGATTCTTCCGCCACCGTCGTGGTGGTTGGGGACGTTCACGGGCAATTGCATGATCTGCTCTTCCTTCTACGAGAGGCCGGTTACCCCTCCCAGGATCGAATCTTTATCTTCAATGGCGATTATGTCGATCGAGGTGCTTGGGGCCTTGAAACTTTCTTGCTCTTGTTGGCGTGGAAGGTATCCATGCCGCATAACATATATTTGCTACGCGGGAATCATGAATCTAAATACTGTACTTCGGTTTATGGTTTTGAGAAAGAGGTAATGGTAAAGTATGGTGATAAAGGTAAGCATGTGTACCGGAAATGTTTGGGATGCTTTGAAGGTCTTCCTTTGGCTTCTATTGTAGCGGGTCGTGTATACACGGCTCATGGAGGTCTTTTCCGCAGTGTAACTGTAACGCCATCAAAGAGATTAAAAGGAAAGAAGAACCGTAAGATTAATTTTAATCCTGATAGCAAAATTCTATCTCTTGGATCGTTGGAAGAATTGTCTAAGGCTCGACGATCAGTTCTTGATCCTCCTTGGGAAGGCTCAAACTTGATTCCTGGTGATGTTCTGTGGTCTGATCCATCAAAAACTCCTGGTCTTGCTCCAAACAAGGAAAGAGGAATTGGCTTGTTGTGGGGTCCTGATTGTACTGAAGAATTTTTGAAGAGGTACCAACTAAAGTTGATCATCAGGTCACATGAAGGTCCTGATGCTAGGGAAAAAAGGGATGATTTTGATGGAATGGCTAATGGTTACACTATTGATCATGTTGTGGATTCTGGAAAGCTGGTCACCCTTTTTAGTGCTCCTGATTACCCACAATTTCAGGCAACAGAGGAGAGGTATAACAACAAGGGTGCCTATGTGGTCCTTGAACCCCCAAATTTTGACGATCCAATATTTCATGGATTTTCAGCAGTTACTCCAAGGCCGAAGGTGAATGCCTATTACGATTATGAAGAGGTGATAGACTCCGATGAAGAATTGGACTTAGCATCCATGGTAACTGCCTGA 1446 0.4606 MALKLPKNSSLTLCSSTMTLNPDSAPPHPSPDSATVNVNGAATSEENQLAQPSSPPPSSLSTSPSPSFPSPPQELRVPIWWSEDGNLSIDWIENLMACFDWSSRNLPPSEFPSVLPVQVFDSLILVASKMLHKEPNCVPVDPFRPNSDSSATVVVVGDVHGQLHDLLFLLREAGYPSQDRIFIFNGDYVDRGAWGLETFLLLLAWKVSMPHNIYLLRGNHESKYCTSVYGFEKEVMVKYGDKGKHVYRKCLGCFEGLPLASIVAGRVYTAHGGLFRSVTVTPSKRLKGKKNRKINFNPDSKILSLGSLEELSKARRSVLDPPWEGSNLIPGDVLWSDPSKTPGLAPNKERGIGLLWGPDCTEEFLKRYQLKLIIRSHEGPDAREKRDDFDGMANGYTIDHVVDSGKLVTLFSAPDYPQFQATEERYNNKGAYVVLEPPNFDDPIFHGFSAVTPRPKVNAYYDYEEVIDSDEELDLASMVTA 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2217g00002 481 MobiDBLite consensus disorder prediction 57 73 - -
Gabi2217g00002 481 Pfam Calcineurin-like phosphoesterase 152 380 IPR004843 GO:0016787
Gabi2217g00002 481 MobiDBLite consensus disorder prediction 30 56 - -
Gabi2217g00002 481 MobiDBLite consensus disorder prediction 1 73 - -
Gabi2217g00002 481 MobiDBLite consensus disorder prediction 8 23 - -
Gabi2217g00002 481 SUPERFAMILY Metallo-dependent phosphatases 111 456 IPR029052 -
Gabi2217g00002 481 ProSitePatterns Serine/threonine specific protein phosphatases signature. 216 221 IPR006186 GO:0016787
Gabi2217g00002 481 PRINTS Serine/threonine phosphatase family signature 152 179 IPR006186 GO:0016787
Gabi2217g00002 481 PRINTS Serine/threonine phosphatase family signature 182 209 IPR006186 GO:0016787
Gabi2217g00002 481 PRINTS Serine/threonine phosphatase family signature 252 278 IPR006186 GO:0016787
Gabi2217g00002 481 PRINTS Serine/threonine phosphatase family signature 312 339 IPR006186 GO:0016787
Gabi2217g00002 481 PRINTS Serine/threonine phosphatase family signature 406 422 IPR006186 GO:0016787
Gabi2217g00002 481 PRINTS Serine/threonine phosphatase family signature 215 239 IPR006186 GO:0016787
Gabi2217g00002 481 FunFam Serine/threonine-protein phosphatase 99 476 - -
Gabi2217g00002 481 CDD MPP_PP7 81 462 IPR041754 -
Gabi2217g00002 481 SMART pp2a_7 115 455 IPR006186 GO:0016787
Gabi2217g00002 481 Gene3D - 110 471 IPR029052 -
Gabi2217g00002 481 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 5-RELATED 62 478 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2217g00002 Gabi-Chr2217 5690 14209 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2217g00002 78 372 Calmodulin-binding Proteins AT5G63870 70.946 2.66e-158 449
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2217g00002 K04460 - gmx:100802851 785.408