Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2214g00024 ATGCCATTGGCACTGAATTTTAGGGTTTTCCTATTTTTTTATTTTATTTTTTATTTTTGGTTTGTTGAACCAATGGCTTCAAGTTTAAGTGGAGGTGGTGGAAGAACCTATGGGTTTGATTTCGATGTTAAAAAATCTTCATCAACATCAACTATAACATCATTCACATCATCTCCTTCCTCAACAACCATATCAGAAACCACCAGCAACAACTCCCAAAGAGCAATCTCAACCAAAAAACCTAGAACTCCTCGAAAGAGACCGAACCAAACGTACAACGAAGCTGCCACGCTCCTTTCCACAGCGTACCCGAACCTCTTCTCCACCGAAAACCTCAAAAAACCAGGCAGATTCACCAAACCAATAACGGAAACGACAAATGAATCATCGGAATTGTTTTTGCCATTCAGAGCCTATGGTTATCACAACGACGACCATTTCCTCTTCCAAAATAAACCCACTTTTGATAACAAGGTCTTGAAGCCCCGCACGTGCCATGGCACGTGCTCAGGGGAGATTACCTCCAGAATGGTGAATTCCGATGAATTGGAGTATGATTCCGGTGAAGGCTTCGATTGCGAATCGATTCTTGATGAGGAAATTGAGGAAGGGATCGATAGCATCATGGGGAGCAGTGTCGATGACGTCAATGGCGGCGCTTCGTGTTACCATGGCGGCGGCGGCCAGCGGCTGAGTACGTCGTTTGGTTTTGGCGGGAAATTCAGTTGGGTGAGGGCTCTCCGGCAAGTTGATGACGCGAACTGGTGGAATTTTCCGGCGGTTGATATGCTTGAAATCTCGCCGGGAGTGAAGAACACTCCGACGGTGGCGGCGGCTGCGGAGAAGAAGAAGAAGAAGAAGAAGGCGGTGAAACCAAAAGTGGAATTGAGGGACTCGAGTCAGGGTTTTTTATTGAAATTGAATTACGACGATGTTTTGAATGCGTGGTCGGACCGGGGGTCGCCGTTCGCTGATGATTGCTCCGGCTCTGGTTTGCCGGGAAATGACTTCACTGTACGTTTCTCATCTCCCGACCAAATAGATTTATTCGCAAACGGAGCAATGAGAGAAGCTAGTATGCTGCGCTACAAAGAGAAGCGCCGTACACGCCTCTCTTCTAAGAAGTTAATCAGATATCAGGTCAGGAAAGTCAATGCAGATCAACGGCCCAGAATCAAGGGAAGATTTATTGGGAGGGTGAATTCTAGCCCTGAAATGCACAAAGATGATTAG 1233 0.4647 MPLALNFRVFLFFYFIFYFWFVEPMASSLSGGGGRTYGFDFDVKKSSSTSTITSFTSSPSSTTISETTSNNSQRAISTKKPRTPRKRPNQTYNEAATLLSTAYPNLFSTENLKKPGRFTKPITETTNESSELFLPFRAYGYHNDDHFLFQNKPTFDNKVLKPRTCHGTCSGEITSRMVNSDELEYDSGEGFDCESILDEEIEEGIDSIMGSSVDDVNGGASCYHGGGGQRLSTSFGFGGKFSWVRALRQVDDANWWNFPAVDMLEISPGVKNTPTVAAAAEKKKKKKKAVKPKVELRDSSQGFLLKLNYDDVLNAWSDRGSPFADDCSGSGLPGNDFTVRFSSPDQIDLFANGAMREASMLRYKEKRRTRLSSKKLIRYQVRKVNADQRPRIKGRFIGRVNSSPEMHKDD 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2214g00024 410 MobiDBLite consensus disorder prediction 50 89 - -
Gabi2214g00024 410 ProSiteProfiles CCT domain profile. 356 399 IPR010402 GO:0005515
Gabi2214g00024 410 MobiDBLite consensus disorder prediction 50 78 - -
Gabi2214g00024 410 Pfam CCT motif 356 397 IPR010402 GO:0005515
Gabi2214g00024 410 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 36 402 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2214g00024 Gabi-Chr2214 243895 247830 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2214g00024 293 399 C2C2-CO-like Transcription Factor Family AT1G25440 38.525 6.04e-17 80.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Gabi2214g00024 CCT 1.6e-14 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2214g00024 - - gmx:100784788 341.273