Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2214g00001 ATGAGTTTCATAGGTGGTGTAAAAGAGCTGGTAAGGTCTTATGATCGAGCAAAAGGTGTTGATTATGAGAATATATTTTTCAGTCTACAGAAGCTGATACGAAAACTAATTCCAGTGGGTGAGGATAACCTAACTTGGACATTGTTGAAGAACGTGAAAAGTGATAACCGTTACGAAGATCTTGAGCGCTTAAGTCAAATTGAAAGCAAGCTAAGTGTGGCTCTTGGAGTATTCCAAGAGTGTTTTGATCCAATTATTAATGATCTCACTGGGAGAGATATTGTATCAGATGTTATTTTTAGTAGAAGTTCAGAACTTAAGCATTTTAACTTTCGTGGGTCCTACATTGTGATTCTGGAGAGTAATGACCATGTGGTTTTTGCTGAAACCATAAGGATTTTATGGCCAAAAGGTTACAGAGTTACCTTTTGTGGCCACTAG 441 0.3741 MSFIGGVKELVRSYDRAKGVDYENIFFSLQKLIRKLIPVGEDNLTWTLLKNVKSDNRYEDLERLSQIESKLSVALGVFQECFDPIINDLTGRDIVSDVIFSRSSELKHFNFRGSYIVILESNDHVVFAETIRILWPKGYRVTFCGH 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2214g00001 146 PANTHER PHD FINGER PROTEIN 12 22 133 IPR042163 GO:0003714|GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2214g00001 Gabi-Chr2214 12391 13483 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2214g00001 21 145 PHD Transcription Factor Family AT5G58610 41.085 9.93e-20 82.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2214g00001 - - qsu:112030964 120.553