Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2205g00001 ATGCCTTCTACTACTCTTCAATGGCTAACCCTTGTTGGCATCATTTGGCTCCAAGCCATAAATGGGACAAACACTGATTTCCCTGCTTACTCTTCCCAGCTGAAGCAGCTTCTTTCTATTTCCCAAGTGCAGCTCAATAATCTTGCTTTTGCCTCTGATGCAGGGAAACTTTTTGGTTGGTTTTCTGGCCTTGCTTCTCTTTACCTCCCACTATGGCTTGTCCTCATGATAGGTTCAACTCTTGGCTTAATTGGTTATGGTGTGCAATATCTCTTCATAACCAACCAAATTTATTCTTTGTCCTATTGGCATGTCTTCTTATTAACTTTTCTGGCTGGGAACAGCATTTGTTGGATCAACACAGTCTGCTATGTTGTCACTATAAGGAACTTCCTATCTTATAGCCAAGTTGCTGTGGGATTAACAACTAGTTACCAAGGATTAAGTGCTAAGATTTATACCAATATTGTTGATGCTGTTTCTCCACACAAAAAAGCTGGAACCTTCCTCTTCCTTAACTCTCTCTTACCTGTGATAGTTGGCCTAATAACAGCTCCTCTAGTTAGAGAAATTGAGGTCACAAGTCCTAATAAGTACACGGGTTTTGGGTTTGCTATGATGTTTGTTATTACAATTGCCACTGGAATTTATGCTGTGATGAGCAGCTTGCACTTTTTCACAAGCAAAATACCCTCACTGGGTATCCTGATTGGTATTCTTGTGTCCCTTCTCTTCCCTCTATTAGTCCCAATTTCAGTGAAGATCAAGGAACTAGTGGAGTCATGGAACAAAAATAGAGAAAGACTTAGAGTCTACCATTTAACGATGGAGGAGAATATTAATGTAGAGGTGACAGAGAATGAAGTGAAAGAGGGTGAAGAGAGGAGAGAAGTTCAAGAAGAGGTTAGTGTTAGAGAAGAAATTGGAGTGAAGTTGATGCTGAGAAGAATAGATTTCTGGTTATATTTCTTTGTATATTTATTTGGTCCAACAATTGGTTTAGTATTTCTTAATAACTTGGGACAAATAGCTGAATCCAGGGGTTGCTCTGGTACCTCATCTTTGGTGTCTTTGTCTTCATCTTTTGGGTTCTTTGGCCGTCTCATTCCATCTCTTATGGACTACTTCTACAGGGGAAAACGTACAATTTCAAGACCTGCTTCTATGGTGGCAGTAATGGCTCCAACATCATGTGCATTCTTCTTACTTCTCAACAAAACTGACCTTGCACTCTACATTAGCACTGCAGTAATTGGAGTGTGTACTGGAACAATCACTTCCCTTGCTGTTTCTATAACCACTGAACTATTTGGCACTAAACATTTCTCTGTGAACCATAATGTGGTCGTGACCAACATTCCCATGGGTTCCTTTTTGTTTGGCTGCTCAGCTGCACTTATTTACCATAAGGAAGGGCATGAACATGGGAAATGCATGGGCATGGAATGTTACAGGAACACTTTTATCATCTGGGGGTCCTTTTGTTTCCTAGGAACTTTCTTGGCTTTGATTCTACATGCTAGGACTCGCAAGTTTTACTCACAAAAATCGTAG 1554 0.4035 MPSTTLQWLTLVGIIWLQAINGTNTDFPAYSSQLKQLLSISQVQLNNLAFASDAGKLFGWFSGLASLYLPLWLVLMIGSTLGLIGYGVQYLFITNQIYSLSYWHVFLLTFLAGNSICWINTVCYVVTIRNFLSYSQVAVGLTTSYQGLSAKIYTNIVDAVSPHKKAGTFLFLNSLLPVIVGLITAPLVREIEVTSPNKYTGFGFAMMFVITIATGIYAVMSSLHFFTSKIPSLGILIGILVSLLFPLLVPISVKIKELVESWNKNRERLRVYHLTMEENINVEVTENEVKEGEERREVQEEVSVREEIGVKLMLRRIDFWLYFFVYLFGPTIGLVFLNNLGQIAESRGCSGTSSLVSLSSSFGFFGRLIPSLMDYFYRGKRTISRPASMVAVMAPTSCAFFLLLNKTDLALYISTAVIGVCTGTITSLAVSITTELFGTKHFSVNHNVVVTNIPMGSFLFGCSAALIYHKEGHEHGKCMGMECYRNTFIIWGSFCFLGTFLALILHARTRKFYSQKS 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2205g00001 517 Coils Coil 282 302 - -
Gabi2205g00001 517 SUPERFAMILY MFS general substrate transporter 201 511 IPR036259 -
Gabi2205g00001 517 Pfam Nodulin-like 7 251 IPR010658 -
Gabi2205g00001 517 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 8 514 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2205g00001 Gabi-Chr2205 12465 14215 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2205g00001 1 516 Nodulin-like Gene Family AT2G30300 49.240 1.06e-158 459
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2205g00001 - - gmx:100793370 781.556