Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2203g00004 ATGGAAAGTGTATTGGAAAACAATTATATTTTTGACATAGATTGCTTGCAAACATTCAAGGGGCTTGGTGGAAGAGAGAGGCGGTCAAATAATGTAGCATTTCCTGCAAATCTTTTGGACAAATGCGATGACCAAGGTTCTGAAAGTGTGCCGGAGTTTTGTATTGATGCAGGATCTACTGGAAATATTGCTAGGTTTATAAACCATTGTTGCGAGCCTAATCTATTTGTTCAATGTGTTTTGAGCACACACCATGATTCGAAATTGGCTCGAGTAGTGTTGTTTGCTTCCGACTTTGCAGGAGCTGACATATGA 315 0.3968 MESVLENNYIFDIDCLQTFKGLGGRERRSNNVAFPANLLDKCDDQGSESVPEFCIDAGSTGNIARFINHCCEPNLFVQCVLSTHHDSKLARVVLFASDFAGADI 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2203g00004 104 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 6 98 - -
Gabi2203g00004 104 ProSiteProfiles SET domain profile. 6 104 IPR001214 GO:0005515
Gabi2203g00004 104 Pfam SET domain 45 97 IPR001214 GO:0005515
Gabi2203g00004 104 SUPERFAMILY SET domain 7 97 IPR046341 -
Gabi2203g00004 104 Gene3D SET domain 2 99 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2203g00004 Gabi-Chr2203 26373 27937 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2203g00004 1 98 EF-hand Containing Proteins AT5G13960 63.000 1.32e-37 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Gabi2203g00004 SET 3.5e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2203g00004 K11420 - gmx:100795584 170.629