Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2202g00016 ATGGTGGTGCCAGAGCAACAAGGCGAGATAGGATCACCATTACATTTCGAGCAACAACTCAACAAGAACCATCCATTCTCATCGCTTGGAAGACAATCCTCAATATACTCTCTGACCCTTGATGAGTTCCAGCACACTCTATGTGAGAGTGGCAAGAATTTTGGATCCATGAACATGGACGAGTTTCTCAGCAGCATATGGAGCGCAGAAGAGAACCAAGCCATAAATTCCAACAACAATAACAATAATAACTATAACAACAACAACATCAATAACTTGTCTCTAAGCGAAACTTCCACAGAGAAAGGAATAAGGAAACAACCAAGCCTTTCTCGACAGGGATCACTAACTATTCCTGCACCTCTGTGTAGGAAAACAGTGGATGAAGTCTGGTCTGAGATACACAAAGGACAACAATCTCAGCAGCAACAACAGCAACAGCAGAATCAGAACAGCAACAACAATGGTGCCAATGGTGCCAATGCAAATGACAATGGTCAGAGTCAGAATACCGAATCTGCCCCTCGCCAACCAACTTTTGGAGAGATGACTTTGGAGGATTTCTTGATTAAAGCTGGGGTAGTTAGGGAACCATGTGCAATGACTGTCCAAGCTTCTCATAATTATGCAATGTACCCAAATAACAACTCTACAATGGGACCCTCTTTTGTTGGAGGTAATAGGCCTGTGATGGGGATTGCTGGCGGTGCAGGAGGGAATGTTGTTGTGCCGCCTTACGCGGTGGCTCAAGGAGGAGGTGGTGGTGGTGTAATTGGGGAGTCTTCTATGTATGCTGGGAATGTGAAAAGGGATAGTGGATATGCGCCACAACCGCAGCCGCCGCCGGGGGTTGGTTTTGGAGGGAGGGTTGTTAATGGAGGAGGTGGTTATGCGGCCGTTGCGCCGACTATAGGAATGGCGGCGCCGGTGAGCCCGGCTTCATCAGATGGGATAGGTACTAGTGAAAACTCTGCTGGTCAATTTGGGATGGAGATGGGTGTGTTTAGAGGAAGAAAGAGGATGTTAGATGGTCCTGTGGAAAAGGTGGTGGAGAGAAGGCAGAGGAGGATGATCAAGAACAGAGAATCAGCAGCCAGATCCAGAGCCAGAAAACAGGCATACACAGTTGAATTAGAAGCAGAACTGAACCAATTAAAAGAAGAGAATGCCCAGCTTAAACAGGCTCTGGCTGAGCAGGAGAGGAGAAGAAAGCAACAGTATTTAGAGGAAATGAACGGGAGAGTTCAAACCAATGCTCAGAAGACCAGAAAGAAATTGAGATCATTGAGAAGGAACCTAAGTTGCCCTTTATGA 1314 0.465 MVVPEQQGEIGSPLHFEQQLNKNHPFSSLGRQSSIYSLTLDEFQHTLCESGKNFGSMNMDEFLSSIWSAEENQAINSNNNNNNNYNNNNINNLSLSETSTEKGIRKQPSLSRQGSLTIPAPLCRKTVDEVWSEIHKGQQSQQQQQQQQNQNSNNNGANGANANDNGQSQNTESAPRQPTFGEMTLEDFLIKAGVVREPCAMTVQASHNYAMYPNNNSTMGPSFVGGNRPVMGIAGGAGGNVVVPPYAVAQGGGGGGVIGESSMYAGNVKRDSGYAPQPQPPPGVGFGGRVVNGGGGYAAVAPTIGMAAPVSPASSDGIGTSENSAGQFGMEMGVFRGRKRMLDGPVEKVVERRQRRMIKNRESAARSRARKQAYTVELEAELNQLKEENAQLKQALAEQERRRKQQYLEEMNGRVQTNAQKTRKKLRSLRRNLSCPL 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2202g00016 437 Pfam bZIP transcription factor 352 397 IPR004827 GO:0003700|GO:0006355
Gabi2202g00016 437 MobiDBLite consensus disorder prediction 133 178 - -
Gabi2202g00016 437 CDD bZIP_plant_BZIP46 352 406 - -
Gabi2202g00016 437 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 355 370 IPR004827 GO:0003700|GO:0006355
Gabi2202g00016 437 MobiDBLite consensus disorder prediction 133 179 - -
Gabi2202g00016 437 FunFam protein ABSCISIC ACID-INSENSITIVE 5 isoform X1 350 406 - -
Gabi2202g00016 437 MobiDBLite consensus disorder prediction 98 117 - -
Gabi2202g00016 437 MobiDBLite consensus disorder prediction 98 116 - -
Gabi2202g00016 437 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 350 402 IPR004827 GO:0003700|GO:0006355
Gabi2202g00016 437 MobiDBLite consensus disorder prediction 410 437 - -
Gabi2202g00016 437 SUPERFAMILY Leucine zipper domain 352 397 IPR046347 GO:0003700|GO:0006355
Gabi2202g00016 437 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 30 426 IPR043452 GO:0003700|GO:0045893
Gabi2202g00016 437 Gene3D - 350 400 - -
Gabi2202g00016 437 Coils Coil 368 410 - -
Gabi2202g00016 437 Coils Coil 412 432 - -
Gabi2202g00016 437 SMART brlzneu 348 414 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2202g00016 Gabi-Chr2202 183049 186386 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2202g00016 22 406 bZIP Transcription Factor Family AT2G36270 50.728 1.72e-104 315
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gabi2202g00016 bZIP_1 3.8e-12 CL0018