Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2197g00025 ATGGCTCCTTCTTCCTCTTTCTCTCTCGCCCTTGTACTCCTCTTCTTCATTGCCACATTCTCACCACTACCTTCTTCTTCTTCTTCTTCAGAACCAGATAAGAAAACCTTCATAATCCAAGTCCAACATGAAGCAAAGCCTTCAATTTTCCCAACCCACAAGCACTGGTATGAGTCCTCACTCTCCACCATTTCCACAAACCCTATTATTCATGTATACGACACCGTTTTCCATGGTTTCTCTGCAAAGCTCTCACCTTTAGAGGCTCAGAAGCTCCAATCACTCTCACATATCATGACCCTTATACCAGAACAAGTTCGCCAACTCCACACCACGCGTTCCCCTCAGTTTCTCGGTCTCAAAACCGCTGACAGAACCGGGTTGCTCCACGAGACTGATTTCGGGTCGGATCTTGTTATCGGAGTTATCGACACTGGGATCTGGCCGGAGAGGCAGAGCTTCAACGACCGCGATCTTGGTCCCATTCCCGCCAAATGGAAAGGCAGGTGCGTCGCCGGAAAAGACTTTCCGGCGAGCTCCTGCAACCGGAAACTCATCGGAGCACGGTATTTCTCGGGCGGGTACGAGTCCACCAACGGGAAGATGAACGAGACGACGGAGTACCGTTCGCCGCGGGACTCCGACGGCCACGGCACTCACACGGCGTCCATCGCTGCCGGCAGGTACGTGTCGCCGGCGTCCACGTTGGGCTACGCCAAGGGGGTTGCCGCCGGCATGGCTCCCAAGGCTAGGCTCGCCGTGTACAAGGTCTGCTGGAACGGCGGCTGCTACGACTCCGACATACTCGCGGCGTTCGACGCCGCCGTGGCCGACGGCGTCGACGTGGCCTCACTTAGCGTCGGAGGTGTGGTGGTGCCGTACTACCTTGACGTCATTGCTATCGGTGCTTTTGGGGCATCCAACGCCGGCGTTTTTGTCTCAGCCTCCGCCGGAAACGGCGGTCCCGGCGGCCTCACCGTCACCAACGTGGCACCTTGGGTGACAACGGTTGGTGCTGGAACCATAGACAGAGATTTCCCTGCTTATGTGAAGCTTGGAAATGGCAAGGTTATAAATGGGGTTAGTGTTTATGGTGGGCCGGGTCTAACTCCGGGTCGGATGTACCCGATTGTGTATGCGGGTACTGAACAAGGTGGGGGTGATGGTTATTCTTCTTCACTTTGCTTGGATGGTTCGTTGGATCCTAAGTATGTGAAGGGCAAGATTGTTGTTTGTGACAGAGGCATTAATTCAAGAGCTGATAAAGGTGAAGTTGTGAAAAAATCTGGAGGAATTGGCATGATTTTGGCTAATGGGGTGTTTGATGGTGAAGGGTTGGTAGCTGATTGTCATGTACTTCCTGCCACCGCCGTCGGTGCCACCGGCGGCGATGAAATTAGGAAGTACGTTGCGGTGGCCGCTAAGTCACGGTCACCGCCAACAGCTAGGATTGTGTTCAAGGGAACTAGGCTTGGTGTTAGGCCAGCACCTGTGGTGGCATCTTTTTCAGCTAGAGGGCCTAATCCTGAATCACCTGAGATTTTGAAGCCTGATGTTATAGCACCAGGGTTGAACATTCTTGCAGCTTGGCCTGATAGAGTTGGACCTTCTGGGGTTCCTTCTGATTTGCGTAGGACTGAGTTTAACATACTTTCAGGTACTTCAATGGCTTGCCCTCATGTTTCTGGTTTGGCTGCTTTGTTGAAAGCAGCACACCCTGATTGGAGTCCTGCTGCTATTAGGTCAGCATTGATGACTACTGCTTATACTGTGGATAATAGGGGTGATACTATGTTGGATGAGTCCACTGGGAATGTTTCCTCAGTCTTTGATTATGGAGCTGGCCATGTTCATCCTGAGAAGGCCATGGACCCTGGCTTGATTTATGATATTTCTAGTTTTGATTATGTGGATTTCTTGTGCAATTCAAATTATACCACTAGGAATATCCAAGTGATCACAAGGAAGGGTGCAGATTGTAGTGGGGCAAAGAAGGCTGGACATACTGGGAATTTGAATTACCCATCTTTGTCTGCAGTGTTTCAACAATATGGTAAGCATAAAATGTCTACACACTTCATTAGAACTGTGACCAATGTTGGGGACCCAAATTCAGTGTACAAAGTCACCATTAGACCACCAGCAAAAATGGTTGTCTCAGTGCAGCCAGAGACCCTATCTTTCAGGAGGTTGGGTCAGAAGTTGAACTTTCTTGTTAGGGTGCAAACTAGGGCAGTTAAGCTTTCCCCTGGAAGTTCTAGTGTGAAGACTGGTTCCATAGTTTGGTCTGATGGCAAGCACACTGTCACAAGTCCCTTGGTTGTGACAATGCAGCAGCCCCTGGATTAG 2349 0.5066 MAPSSSFSLALVLLFFIATFSPLPSSSSSSEPDKKTFIIQVQHEAKPSIFPTHKHWYESSLSTISTNPIIHVYDTVFHGFSAKLSPLEAQKLQSLSHIMTLIPEQVRQLHTTRSPQFLGLKTADRTGLLHETDFGSDLVIGVIDTGIWPERQSFNDRDLGPIPAKWKGRCVAGKDFPASSCNRKLIGARYFSGGYESTNGKMNETTEYRSPRDSDGHGTHTASIAAGRYVSPASTLGYAKGVAAGMAPKARLAVYKVCWNGGCYDSDILAAFDAAVADGVDVASLSVGGVVVPYYLDVIAIGAFGASNAGVFVSASAGNGGPGGLTVTNVAPWVTTVGAGTIDRDFPAYVKLGNGKVINGVSVYGGPGLTPGRMYPIVYAGTEQGGGDGYSSSLCLDGSLDPKYVKGKIVVCDRGINSRADKGEVVKKSGGIGMILANGVFDGEGLVADCHVLPATAVGATGGDEIRKYVAVAAKSRSPPTARIVFKGTRLGVRPAPVVASFSARGPNPESPEILKPDVIAPGLNILAAWPDRVGPSGVPSDLRRTEFNILSGTSMACPHVSGLAALLKAAHPDWSPAAIRSALMTTAYTVDNRGDTMLDESTGNVSSVFDYGAGHVHPEKAMDPGLIYDISSFDYVDFLCNSNYTTRNIQVITRKGADCSGAKKAGHTGNLNYPSLSAVFQQYGKHKMSTHFIRTVTNVGDPNSVYKVTIRPPAKMVVSVQPETLSFRRLGQKLNFLVRVQTRAVKLSPGSSSVKTGSIVWSDGKHTVTSPLVVTMQQPLD 782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2197g00025 782 FunFam Subtilisin-like protease SBT1.9 25 110 - -
Gabi2197g00025 782 CDD PA_subtilisin_like 349 484 - -
Gabi2197g00025 782 Gene3D Peptidase S8/S53 domain 137 636 IPR036852 GO:0004252|GO:0006508
Gabi2197g00025 782 Pfam Fibronectin type-III domain 671 775 IPR041469 -
Gabi2197g00025 782 CDD Peptidases_S8_3 108 589 IPR034197 -
Gabi2197g00025 782 Gene3D - 343 492 - -
Gabi2197g00025 782 Gene3D - 640 778 - -
Gabi2197g00025 782 FunFam subtilisin-like protease SBT1.5 343 491 - -
Gabi2197g00025 782 FunFam Subtilisin-like protease SBT1.5 640 778 - -
Gabi2197g00025 782 Pfam Peptidase inhibitor I9 36 110 IPR010259 -
Gabi2197g00025 782 PRINTS Subtilisin serine protease family (S8) signature 135 154 IPR015500 -
Gabi2197g00025 782 PRINTS Subtilisin serine protease family (S8) signature 552 568 IPR015500 -
Gabi2197g00025 782 PRINTS Subtilisin serine protease family (S8) signature 213 226 IPR015500 -
Gabi2197g00025 782 ProSiteProfiles Serine proteases, subtilase domain profile. 114 623 - -
Gabi2197g00025 782 Pfam Subtilase family 135 605 IPR000209 GO:0006508|GO:0008236
Gabi2197g00025 782 Pfam PA domain 375 465 IPR003137 -
Gabi2197g00025 782 SUPERFAMILY Subtilisin-like 109 627 IPR036852 GO:0004252|GO:0006508
Gabi2197g00025 782 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 62 775 IPR045051 -
Gabi2197g00025 782 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 22 110 IPR037045 -
Gabi2197g00025 782 ProSitePatterns Serine proteases, subtilase family, serine active site. 553 563 IPR023828 -
Gabi2197g00025 782 FunFam Subtilisin-like protease SBT1.5 137 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2197g00025 Gabi-Chr2197 275243 277768 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2197g00025 36 781 Subtilisin-like Serine Gene Family AT3G14240 78.533 0.0 1221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2197g00025 - - gmx:100808511 1330.47