Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2197g00003 ATGAGAGAAGAGATGAACCAGGCATTAGTTGCTCCCTTTAGGGACCAATGCAACATGGGAGGGTTAGTGCTAGTGATGTGCATGGTTGTTTCATGGATGTTCATACACAGATGGAGTCAAAGGAACAAGTTAGGCCCCAAAACATGGCCCTTTCTTGGAGCTTCCATTGAACAATTAATGAACTATGACAGGATGCATGATTGGCTTGTCCAATATTTGTCCAAGTCAAAAACTGTTGTGGTCCCTATGCCATTCACAACTTACACTTACATAGCTGATCCTGCTAATGTGGAACATGTACTTAAGACCAACTTCAATAATTATCCGAAGGGTAAAGTTTATCATTCCTATATGGAAGTTCTTCTTGGAGATGGGATCTTTAATGTTGATGGTGAGCTTTGGAAGAAACAAAGGAAGACAGCAAGCTTAGAGTTTGCATCCAGAAATTTGAGGGATTTCAGCACCAAAGTTTTCAGGGAGTATGCCTTAAAACTCTCTGCCATTCTCAGTCAAGCATCTTTCCTCAACCAAGAAATAGACATGCAGGAGTTGTTGATGAGAATGACTTTAGACTCCATATGTAAAGTGGGATTTGGTGTGGAAATTGGAACTTTGACTCCCAATTTACCAGACAATTCTTTTGCTCGGGCCTTTGACACTGCAAACATCATAGTAACACTTCGCTTCATTGATCCACTATGGAAAATTAAGAAAATTCTAAATATAGGGTCAGAAGCACAACTTCATAAGAGCATCAAAGTCATTGATGATTTCACTTACTCAGTAATTCGTAGAAGGAAGGCAGAGATAGAGGATGCTAAAAAGAATGGGCAACAAAATCAGATAAAACATGATATATTATCAAGATTCATAGAACTGGGAGAAAGCAATGCATCAGCCAAGAGTCTAAGAGATGTTGTCTTGAACTTTGTAATTGCTGGTCGAGACACAACCGCAACAACTGTATCATGGGCCATTTATATGGTAATTACACATGCTCATGTTGCTGACAAACTTTACTTAGAGCTCAAAACTTTTGAGGAGAATCGAGCAAACAAAGAGAATATTTCCTTGCTTCAATGTGACATAGGAGACCCTGAATCATTCAATCAAAGAGTAGCTCAATTTTCAAGGTTATTGAATAAAGATTCACTAGAAAAACTGCACTATTTGCATGCAGTCATAACGGAGACCCTAAGATTGTATCCAGCTGTTCCTCAGGATCCTAAGGGCATCTTGGAAGACGATGTCTTGCCAGATGGAACCAAAATAAAAGCAGGTGGCATGGTAACATATGTTCCATACTCTATGGGAAGGATGGAATATAACTGGGGCCCTGATGCAGCTTCATTTACACCTGAAAGATGGTTCAAGGATGGTATTCTCCAAAATGAATCTCCATTCAAATTCACTGCTTTTCAGGCAGGGCCAAGGATATGCCTTGGAAAGGACTCTGCATATCTCCAGATGAGGATGGTATTGGCTATTTTGTGCAGATTTTACAAATTCAACTTGGTGCCTGGTCATTCAGTGAAATACAGGATGATGACTATATTATCAATGCAACATGGCTTGAAGCTTACAATAGAGAGACGTTCTTGA 1602 0.3964 MREEMNQALVAPFRDQCNMGGLVLVMCMVVSWMFIHRWSQRNKLGPKTWPFLGASIEQLMNYDRMHDWLVQYLSKSKTVVVPMPFTTYTYIADPANVEHVLKTNFNNYPKGKVYHSYMEVLLGDGIFNVDGELWKKQRKTASLEFASRNLRDFSTKVFREYALKLSAILSQASFLNQEIDMQELLMRMTLDSICKVGFGVEIGTLTPNLPDNSFARAFDTANIIVTLRFIDPLWKIKKILNIGSEAQLHKSIKVIDDFTYSVIRRRKAEIEDAKKNGQQNQIKHDILSRFIELGESNASAKSLRDVVLNFVIAGRDTTATTVSWAIYMVITHAHVADKLYLELKTFEENRANKENISLLQCDIGDPESFNQRVAQFSRLLNKDSLEKLHYLHAVITETLRLYPAVPQDPKGILEDDVLPDGTKIKAGGMVTYVPYSMGRMEYNWGPDAASFTPERWFKDGILQNESPFKFTAFQAGPRICLGKDSAYLQMRMVLAILCRFYKFNLVPGHSVKYRMMTILSMQHGLKLTIERRS 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2197g00003 533 Gene3D Cytochrome P450 29 533 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2197g00003 533 PANTHER CYTOCHROME P450 33 525 - -
Gabi2197g00003 533 Coils Coil 336 356 - -
Gabi2197g00003 533 PRINTS E-class P450 group I signature 470 480 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2197g00003 533 PRINTS E-class P450 group I signature 480 503 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2197g00003 533 PRINTS E-class P450 group I signature 302 319 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2197g00003 533 PRINTS E-class P450 group I signature 322 348 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2197g00003 533 PRINTS E-class P450 group I signature 392 410 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2197g00003 533 Pfam Cytochrome P450 45 525 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2197g00003 533 PRINTS P450 superfamily signature 393 404 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2197g00003 533 PRINTS P450 superfamily signature 480 491 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2197g00003 533 PRINTS P450 superfamily signature 471 480 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2197g00003 533 PRINTS P450 superfamily signature 313 330 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2197g00003 533 SUPERFAMILY Cytochrome P450 35 532 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2197g00003 533 FunFam Alkane hydroxylase MAH1 39 533 - -
Gabi2197g00003 533 CDD CYP86A 77 525 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2197g00003 Gabi-Chr2197 20856 23906 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2197g00003 19 533 Cytochrome P450 AT1G69500 74.809 0.0 829
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2197g00003 K20495 - gmx:100787802 944.495