Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2194g00020 ATGGCAAGCCTGATTCAGCAAGAAAGTGATGCAACAATCTCATCGAGGATTGGAGGTAGCAACCGCATCGTAGCCTTCAACGTGACCCCTCCTAACAACTCTTCTCCACCGTCTGATTCCGATGGCTCCTCAAATATCGAGAAACCTGGGTGGAAAAAGTTCCTGTCACATGTGGGTCCTGGTTTCCTCGTTTCAATGGCTTACATAGATGGTGGAAGCTTGGAAACTGATCTGCAAGCTGGAGCTAACTATGGATATGAGATGCTGTGGTTGGTACTTCTTGGAATGATATTTGCTCTTGTAATTCAATCATTGGCTGCAAATCTTGGCGTAACCACTGGAAAGCACCTTGCAGAAATATGTAAAGCTGAGTACCCATTATTTGTCAAGTACTGTTTATGGTTATTGGCCGAGCTTGCTGTCATAGCTGCAGACATACCTGATGTGCTTGCCACAGCCATTGCGTTTAATCTACTTTTCAACGCCATTCCATTATGGTTAGGAGTTCTGTTGACTGGCGGCAGCACTCTCTTGTTTCTTGCACTTCAGAGATATGGGATAAGGAAGCTGGAATTGGTCATAGCTATCTCAATTTTGTTATTGGCTGCGTGTTTCTTTGCGGAAATGAGCTATGCGAAAGTCAGTACTTCTGGTGTACTAAAGGGAATGTTTGTGCCCAAGCTCAGTGGTAACGGAGCCACAGGCAATGCGATTGCCCTTTTTGGTGCCCTTATCATGCCACATAACCTTTTCCTTCACTCTGGCCTTGTGCTGTCTAGAAAAGTACCCCATTCCGCGAATGGTGTCAAGGAAGCACGTACATACTTTCTCATAGAGAGTGGGTTTGCACTATTTGTGGCATTCTTAATACAAGTTGCAATGGTTTCTGTGCCGGCTGCTGTTTGCTCCGGTAGCAACCTTTCTGCAGAAGATGGTGATAATTGCAATAATATTACTCTTAAATCTGCTTCTTTCCTTCTCAAGAGTGTGTTAGGACGGTCAAGCAAGACCATTTATGCCATAGCACTGCTAGCTTCAGGACTAAGCTCTACTATCACTGGAACCTGTGCAGGGCAATATATCATGCAGGGTTTCTTTGACTTAAAGATGAAAGGATGGATTCAGAACATGGTGACTAGGGGAATTGCCATAATACCTAGTCTTGTTGTCTCCATCGTTGGTGGTCCTTCTGGGTCTGGTCAACTTATCATCATTGCATCGATGGTCCTTTCTTTTGAGCTTCCATTCGCTTTAATTCCACTCCTTAAGTTTAGTAATAGCAGTGCCAAGATGGGAACTCAAAAGAATTCTAAGATTGTTATTATCATCTCATGGATATTAAGTGTGGGGATTTTCGGTATTAATATGTACTTCCTCGGCACTGCTTTTGTGGGTTGGCTAATTCATAGTAGTCTACCAAAAGTGGCAAATGTGTTCATTGGGATCATAGTATTTCCTTTAATGGCAATCTATGTTATTTCAATTATCTACCTAACCTTCAGGAAAGACACAGTTAAAACATTTAAGGAGAGGGAGAATGAAATAGCAATGCAAGACCATGTAGAAAGTGGAGTTCAAAATATTGGTCAGTTAGAGTTGAACCAAGCTCCCTATAGAGAAGATTTAGCCGATATCCCATTTCCCGAATATGGGACTTAG 1659 0.4268 MASLIQQESDATISSRIGGSNRIVAFNVTPPNNSSPPSDSDGSSNIEKPGWKKFLSHVGPGFLVSMAYIDGGSLETDLQAGANYGYEMLWLVLLGMIFALVIQSLAANLGVTTGKHLAEICKAEYPLFVKYCLWLLAELAVIAADIPDVLATAIAFNLLFNAIPLWLGVLLTGGSTLLFLALQRYGIRKLELVIAISILLLAACFFAEMSYAKVSTSGVLKGMFVPKLSGNGATGNAIALFGALIMPHNLFLHSGLVLSRKVPHSANGVKEARTYFLIESGFALFVAFLIQVAMVSVPAAVCSGSNLSAEDGDNCNNITLKSASFLLKSVLGRSSKTIYAIALLASGLSSTITGTCAGQYIMQGFFDLKMKGWIQNMVTRGIAIIPSLVVSIVGGPSGSGQLIIIASMVLSFELPFALIPLLKFSNSSAKMGTQKNSKIVIIISWILSVGIFGINMYFLGTAFVGWLIHSSLPKVANVFIGIIVFPLMAIYVISIIYLTFRKDTVKTFKERENEIAMQDHVESGVQNIGQLELNQAPYREDLADIPFPEYGT 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2194g00020 552 Hamap Divalent metal cation transporter MntH [mntH]. 37 463 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gabi2194g00020 552 PRINTS Natural resistance-associated macrophage protein signature 187 208 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gabi2194g00020 552 PRINTS Natural resistance-associated macrophage protein signature 375 392 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gabi2194g00020 552 PRINTS Natural resistance-associated macrophage protein signature 407 426 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gabi2194g00020 552 PRINTS Natural resistance-associated macrophage protein signature 133 159 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gabi2194g00020 552 PRINTS Natural resistance-associated macrophage protein signature 237 260 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gabi2194g00020 552 PRINTS Natural resistance-associated macrophage protein signature 347 366 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gabi2194g00020 552 PRINTS Natural resistance-associated macrophage protein signature 162 181 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gabi2194g00020 552 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 46 509 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gabi2194g00020 552 NCBIfam Nramp family divalent metal transporter 59 428 - -
Gabi2194g00020 552 NCBIfam metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 53 429 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gabi2194g00020 552 Pfam Natural resistance-associated macrophage protein 75 438 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2194g00020 Gabi-Chr2194 221077 231457 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2194g00020 19 549 Inorganic Solute Cotransporters AT1G15960 53.371 0.0 560
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2194g00020 K21398 - gmx:100787785 760.37