Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2194g00002 ATGGTAGAAACAGTTGCTAGATTAGCCCAGTGGAAAATCGACGACTTCGGACCTTGTTCCTACAAGAAATCGGAGCCTTTCAAGGTCGGAATCTGGAACTGGTACTTTTCAATAGTGAGGAATAGGTGCCTCTCCATTTATCTTTTTCCAGAACCTTCTAAGGAACATCCACCTTTTGCTCGATTCATTCTCCGAGTCTCCAATGCCGGCTCATCCCGCAGGTTTCATATTTCCCCTGTTCATGAAAGGCTGCTTAGGAATCATGATGACTTTGTCTGGCATGTTGATACTACTTTTGTTGGCCGCTTCATTATTGATGTTGAGTTTCTAGACCTGAAGATAAGCCCCCTGAATGGTGGAGAAGCACGTTCAATATGGCCATCTGATGGAAATTTGCAATCCATTATAGCTCAAAGTAGTACACTTCGTTGCCTTGCTCGCATGCTTGATGAGGCTATACATGCTGATCTAACCATTATCACTGCTGATGGTACATTGAGAGCTCACAAGGCAGTTTTGTCCGCAAGTTCTCCTGTGTTCCAGAGCATGTTTCATCACAACCTGAAGGAAAAAAAGTCGTCTACAATCCATATAGAAGACATGTCACTTGAATCCTGCATGGCTCTTCTAAGTTACTTGTATGGAACAATCAAACAAGAAGATTTCTGTAAACACCGGCTTGCATTGCTTGGAGCAGCAAATAAATATGACATTGGTGGTCTTAAAGATTTCTGCGAGGAAAGCCTACTGGAAGATCTTAACTTAGTAAATGTTCTTGAGATGCTAAATGAGGCTTGGTTTTATCAATTACACAAGTTAAAGAAAGGATGTTTTAAATTCTTATTTGAATTTGGTAAGATATATGATGTTAGAGATGATGAATTAAGTTCCTTTTTCCAGCATGCTGATAGGGAGCTAATGCTGGAGATGTTTCAGGAGGTGCTTAAACTTTCGAAACCAGTATAG 966 0.4068 MVETVARLAQWKIDDFGPCSYKKSEPFKVGIWNWYFSIVRNRCLSIYLFPEPSKEHPPFARFILRVSNAGSSRRFHISPVHERLLRNHDDFVWHVDTTFVGRFIIDVEFLDLKISPLNGGEARSIWPSDGNLQSIIAQSSTLRCLARMLDEAIHADLTIITADGTLRAHKAVLSASSPVFQSMFHHNLKEKKSSTIHIEDMSLESCMALLSYLYGTIKQEDFCKHRLALLGAANKYDIGGLKDFCEESLLEDLNLVNVLEMLNEAWFYQLHKLKKGCFKFLFEFGKIYDVRDDELSSFFQHADRELMLEMFQEVLKLSKPV 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2194g00002 321 SUPERFAMILY POZ domain 138 251 IPR011333 -
Gabi2194g00002 321 CDD BTB_POZ_ZBTB_KLHL-like 154 236 - -
Gabi2194g00002 321 PANTHER OS08G0495500 PROTEIN-RELATED 2 320 IPR044714 -
Gabi2194g00002 321 SMART BTB_4 155 253 IPR000210 GO:0005515
Gabi2194g00002 321 Pfam BTB/POZ domain 148 251 IPR000210 GO:0005515
Gabi2194g00002 321 Gene3D Potassium Channel Kv1.1; Chain A 131 282 IPR011333 -
Gabi2194g00002 321 SUPERFAMILY TRAF domain-like 10 90 - -
Gabi2194g00002 321 CDD MATH 11 94 IPR002083 GO:0005515
Gabi2194g00002 321 ProSiteProfiles BTB domain profile. 155 214 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2194g00002 Gabi-Chr2194 40057 42283 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Gabi2194g00002 BTB 3.6e-21 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2194g00002 K10523 - gmx:100787262 523.857