Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2187g00003 ATGGAAAATGATTCTGAATCTGAGAGAATCAAAGGAATAGGAATTCCCATTCACGGAGGGAAGTATGTACGTTACAACATTTTGGGCAACCATTTCGAGGTCTACGCTAAGTACGCTCCTCCTCTTCAACCCGTTGGACGCGGCGCATACGGCATCGTTTGCTGTGCAACGAATTCGGAGACCAAAGAAGGGGTTGCGATTAAGAAGATTGGGAATGCCTTTGGCAATAGGATTGATGCTAAAAGGACACTTCGAGAAATCAAACTTCTTTGTCACATGGAACATGATAACATAATTGAAATTAAGGACATAATTCGGCCACCAGATAGGGAAAATTTCGATGATGTGTACATTGTGTACGAATTGATGGATACTGATCTGCATCAGATTATACAATCTAACCAGGTTCTCACGAATGAGCACTGCCAGTATTTTCTATATCAACTCTTGCGAGGATTGAAGTACGTACACTCTGCAAATGTTTTGCACCGAGATCTAAAACCGAGCAATTTACTTCTCAATGCAAACTGTGATCTTAAAATATGTGACTTTGGGCTTGCCAGAACGACCTCTGAGACAGACGTTATGACAGAATATGTTGTGACTCGTTGGTACAGAGCCCCTGAATTGCTACTAAATTGTTCAGAATATACTGCAGCTATTGACATATGGTCGGTTGGTTGCATTTTAATGGAGATAATTAGAAGGGAGCCTTTATTTCCCGGTAAAGATTATGTTCAGCAGTTGGCGCTTATAACTGAGTTACTAGGTTCACCAAATGACTCAGATTTTGGATTCATCAGAAGTGATAATGCAAAGAAATATGTTAAGCAGCTCCCTCATGTAGAAAAGCAGCCCTTTGCACAGAGGTTTCCTGACATGTCCCTGTTGGCAATTGATCTTGCTGAGAAAATGTTGGTTTTTGATCCCTCCAAACGCATAACTGTGGAGGAAGCGCTGAATCACCCATATTTGTCAAGTCTTCATGAGATCAATGAGGAGCCCACATGCCAAACTCCTTTCGTCTTTGATTTTGAACAGACAATTCTGAACGAAGAAGATATAAAGGAGCTCATATGGAGGGAGTCTCTGAAATTCAGCCAAGGTCAGATGCTGGAATAG 1122 0.4144 MENDSESERIKGIGIPIHGGKYVRYNILGNHFEVYAKYAPPLQPVGRGAYGIVCCATNSETKEGVAIKKIGNAFGNRIDAKRTLREIKLLCHMEHDNIIEIKDIIRPPDRENFDDVYIVYELMDTDLHQIIQSNQVLTNEHCQYFLYQLLRGLKYVHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDVMTEYVVTRWYRAPELLLNCSEYTAAIDIWSVGCILMEIIRREPLFPGKDYVQQLALITELLGSPNDSDFGFIRSDNAKKYVKQLPHVEKQPFAQRFPDMSLLAIDLAEKMLVFDPSKRITVEEALNHPYLSSLHEINEEPTCQTPFVFDFEQTILNEEDIKELIWRESLKFSQGQMLE 373
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Gabi2187g00003 373 ProSiteProfiles Protein kinase domain profile. 39 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2187g00003 373 ProSitePatterns Protein kinases ATP-binding region signature. 45 69 IPR017441 GO:0005524
Gabi2187g00003 373 CDD STKc_TEY_MAPK 32 367 - -
Gabi2187g00003 373 FunFam Mitogen-activated protein kinase 24 134 - -
Gabi2187g00003 373 ProSitePatterns MAP kinase signature. 74 177 IPR003527 GO:0004707|GO:0005524|GO:0006468
Gabi2187g00003 373 Gene3D Phosphorylase Kinase; domain 1 22 362 - -
Gabi2187g00003 373 Pfam Protein kinase domain 43 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2187g00003 373 SMART serkin_6 39 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2187g00003 373 SUPERFAMILY Protein kinase-like (PK-like) 42 331 IPR011009 -
Gabi2187g00003 373 ProSitePatterns Serine/Threonine protein kinases active-site signature. 161 173 IPR008271 GO:0004672|GO:0006468
Gabi2187g00003 373 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 38 326 - -
Gabi2187g00003 373 Gene3D Transferase(Phosphotransferase) domain 1 123 352 - -
Gabi2187g00003 373 FunFam Mitogen-activated protein kinase 123 352 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Gabi2187g00003 Gabi-Chr2187 104921 108828 Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2187g00003 14 366 MAP Kinase Gene Family AT1G07880 78.470 0.0 602
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Gabi2187g00003 Pkinase 3.7e-70 CL0016