Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2183g00002 ATGAAGGAAACCAACATAATTGAGTCATGCAGGTTTTTCATTAGCTTTGTACCACACATCTTCTTGTTCTTGTTCTTCTTCAATTTAACCACTTGTGATTCAATTAATGTCCCTTCAGATAAAATCCTCCTCAATTGTGGTTCTTCAGGAGCATCACAATTCAATGGTGTTAATTGGATAGGAGATATTGGATCTAGTTTCTTGCCTCCAGCATATGACAAGAGTTCAACTTCATTCTTGGTCTCAAACACACACCCTCTAGCACCAAAAGTCCCTTACTCAACAGCAAGAACAATTCATTCTCCATTGACCTACTCATTCCCATTTTCCCCTGGCCTTAAATTCATTCGCTTTTACTTTCTCTCAACTTCATATTTGATGATGAACCCCTCCAATGCTTATTTTTCTGTCAAAGCTGGTCCTTACACTCTAGTTAGTAATTTTAGTCCATCTGTTGCTGCTGAAGAGCTCAACTTAGTGTATATCACTAAGCATTTCTTAGTTAATGTCAATGAAAAGAAACTAAACATTACTTTCAGTCCATCACCTCTAATTTCCAATGCATTTGCCTTTGTAAATGGCATTGAGATCTTCTCAGTTCCCCCCAGTACATACTTCCAAGGTTCCAAGGTTCGTGTTCCTTACCTCGGGCATCAAGAAACGTTATTTATTAATGATGAATATGCTCTTGAGATGCTTTACCTTGTTCAAGTTGGTGGTGATGATCACACTGTTGATGTTGGAAATTCATTTGGGACATGGTCGGAAGATAAGAGCTCCATATTTGGTTTACAATATGGAAGTGTTCTTAATATAAAGAGCCGTCCCGTTAACTTGAATTACACCACTATGAGTTCAAATGATTATAATTTTTCAGCTCCAGAAGAACTATATTGGACTGCCAGGACTATGGGTAGCAATGGAGACAACAACATGAGATACAATTTAACATGGTCATTCCCTGTTGATTCTGGATTCAATTACCTTGTTAGGCTTCATTTTTGTGAGATCTCCTTAGAGGTAACGCGGTTCAACCAAAGGGTGTTCAAGGTGTTCATAAACAACCAAACAGCAGAGGAGAGGATGGACTTGGTTGCTTTGGCTGGTGCACCGTTTACTCCTTTATACAGAGACTATGTTGTTATGGTTCCTATGAAAAGTGAGACAAGGCAAGATATGTGGATCGCACTTCACCCCAACTTGGAATCAAATCCTAAATATGCTGATGCCATATTGAATGGCATTGAGATCATCAAGTTAAGTGATAGCAATTATAATCTTGCATCAAGTTTCCAGCTGAAAAAGGAACAAAAGGAGAAGAAGAAGAAGAAACTTCCACACGTCATTGTTGTTGCTGCTATTTCAGGTATCATTTTGGTACTTTTCATTACATGTTTAATTCTTATACGAAGAGCATGGAAAAAACTGAAGAGGGGAAATTTTTGGGTACTCCCATTAAATCATACTGGAAGAAGTCAGGAAAATATTCAAGTAACAGTGACCTCAGGTCATGGCTATCATCAATTCACATTAGCAGAGATCAGCATAGCCACCAACAAATTCAGTGAAGCTCTTGTCATTGGGGAGGGAGGCTTTGGAAAAGTGTACAAAGGCATCATGCATGGTGGAGTTACTCCTGTGGCAATAAAGCGCTCTAAACCGAGTTCTGGTCAAGGATTTAAGGAGTTTCAAAATGAGATCAATTTTTTCTCCTTTTGCCACATGAATCTAGTGTCACTGCTTGGTTACTGCCAAGAGGGAAATGAACTTATACTTGTCTATGAATACATGGCTCAGGGCTCTCTTTGTGATCATTTATACAAGAAACAAAAACAGCCACTGCCTTGGAATCAAAGACTAAAGATCTGTGTTGGTGCAGCTAGAGGACTACATTACCTCCACACGGGCACAAGGCACCCAGTTATTCACCGTGATATCAAATCATCCAACATATTATTGGATCATAATTTTGTACCCAAGATTGCAGATTTTGGGTTATCTAGAATAGTTCCTTCAATTTACCACAGCCATGTTAGCACTGAGGTTAAAGGTACTTTTGGATATTTAGATCCTGAGTACTATAAGCGAAGAAAACTGACCGAAAAATCTGATGTCTTTTCATTTGGGGTGGTTTTGTTTGAAGTGTTGTGTGGAAGACCAGCTGTGAATCCTATTGCAGTGGAAGAGGAAAGTGAGAAAGTTGGATTGGCCCAGTGGGCCTTGCATTGTTACCAATCTGGAACCATTGATCAATTAGTTGATCAACATCTAGATGGAAAGATTAAGCCAGAATATCTAATGGCTTTTGTGGACATTGGCATACAGTGCTTGGCTAACAAGAGTGCAGAAAGGCCAACTATGGGGGAGGTGCTTAGTAATTTGGAGAAGATCTTTTCCTTGCATGAGAGTTTAGAAGAACGAGAAATTACCACAGGTCAATTTATACATGAGACTGGACTGGAGTATATGACATGA 2475 0.3915 MKETNIIESCRFFISFVPHIFLFLFFFNLTTCDSINVPSDKILLNCGSSGASQFNGVNWIGDIGSSFLPPAYDKSSTSFLVSNTHPLAPKVPYSTARTIHSPLTYSFPFSPGLKFIRFYFLSTSYLMMNPSNAYFSVKAGPYTLVSNFSPSVAAEELNLVYITKHFLVNVNEKKLNITFSPSPLISNAFAFVNGIEIFSVPPSTYFQGSKVRVPYLGHQETLFINDEYALEMLYLVQVGGDDHTVDVGNSFGTWSEDKSSIFGLQYGSVLNIKSRPVNLNYTTMSSNDYNFSAPEELYWTARTMGSNGDNNMRYNLTWSFPVDSGFNYLVRLHFCEISLEVTRFNQRVFKVFINNQTAEERMDLVALAGAPFTPLYRDYVVMVPMKSETRQDMWIALHPNLESNPKYADAILNGIEIIKLSDSNYNLASSFQLKKEQKEKKKKKLPHVIVVAAISGIILVLFITCLILIRRAWKKLKRGNFWVLPLNHTGRSQENIQVTVTSGHGYHQFTLAEISIATNKFSEALVIGEGGFGKVYKGIMHGGVTPVAIKRSKPSSGQGFKEFQNEINFFSFCHMNLVSLLGYCQEGNELILVYEYMAQGSLCDHLYKKQKQPLPWNQRLKICVGAARGLHYLHTGTRHPVIHRDIKSSNILLDHNFVPKIADFGLSRIVPSIYHSHVSTEVKGTFGYLDPEYYKRRKLTEKSDVFSFGVVLFEVLCGRPAVNPIAVEEESEKVGLAQWALHCYQSGTIDQLVDQHLDGKIKPEYLMAFVDIGIQCLANKSAERPTMGEVLSNLEKIFSLHESLEEREITTGQFIHETGLEYMT 824
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2183g00002 824 Pfam Malectin-like domain 44 419 IPR024788 -
Gabi2183g00002 824 SMART serkin_6 521 798 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2183g00002 824 ProSiteProfiles Protein kinase domain profile. 521 804 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2183g00002 824 Gene3D Phosphorylase Kinase; domain 1 485 596 - -
Gabi2183g00002 824 Gene3D Transferase(Phosphotransferase) domain 1 597 816 - -
Gabi2183g00002 824 Pfam Protein tyrosine and serine/threonine kinase 526 794 IPR001245 GO:0004672|GO:0006468
Gabi2183g00002 824 FunFam Receptor-like protein kinase FERONIA 597 815 - -
Gabi2183g00002 824 ProSitePatterns Serine/Threonine protein kinases active-site signature. 641 653 IPR008271 GO:0004672|GO:0006468
Gabi2183g00002 824 ProSitePatterns Protein kinases ATP-binding region signature. 527 550 IPR017441 GO:0005524
Gabi2183g00002 824 CDD STKc_IRAK 527 797 - -
Gabi2183g00002 824 PANTHER OS03G0124300 PROTEIN-RELATED 15 475 IPR046957 GO:0004672
Gabi2183g00002 824 FunFam FERONIA receptor-like kinase 41 201 - -
Gabi2183g00002 824 FunFam receptor-like protein kinase FERONIA 486 596 - -
Gabi2183g00002 824 SUPERFAMILY Protein kinase-like (PK-like) 497 794 IPR011009 -
Gabi2183g00002 824 FunFam FERONIA receptor-like kinase 228 421 - -
Gabi2183g00002 824 Gene3D - 42 200 - -
Gabi2183g00002 824 Gene3D - 228 421 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2183g00002 Gabi-Chr2183 13714 16188 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2183g00002 38 806 Receptor kinase-like Gene Family AT3G51550 45.398 0.0 678
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Gabi2183g00002 Malectin_like 1.1e-28 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2183g00002 - - gmx:100776324 1148.65