Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2183g00001 ATGAATGCTGTTGTATGTTCTATATACATTTTTATCTTAAACTTGTATCTCTTACACCTACAACTAATTGTTGCCGCTGATAATTATTATGCTAGTTATGTTCCCTCAGAGAACATAGTTCTCAACTGTGGGTCTTACACATCTGAACTTGTACAATATGATGGCAGGAACTGGAATGGTGACATTGCTTCACCATATTTACCCTCTAAATTCAAGTCCCTTACAGCAAGAGCCCCTACCACTCTTCAATCTATTCCTGAAGTTCCCTATATGACTGTTAGGATCTTTCAGTCTCAATTCACTTACAGATTCAATGTAACCCCAGGTCCAAAATTCATTCGGCTTCACTTCTACCCTGCTTCGTACTTGGATCTCAATATCTCCAAAGCTTTCTTATCACTCAGTGCTGGTAACTTCACTCTTCTACATAACTTCAGTGTTTCACTCAATGCTGATTACTTCAACTTAGCATATTTCATGAAAGAATTCATTGTCCATGTAAGTGGAAGTACTTTAGAACTTACTTTCACCCCATCATCCAATGCTTCTGATGCATATGCATTTGTGAATGGGATTGAAGTTGTTTCAATGCCCCTTCATTTATACACTCGTGGTGATGATGCTCCTCTTCCTTTAGTTGGTCACTATCCTACACTGTTGTACCTTTATAATGATTCTGCCTTAGAAAACATGTATAGAATTAATGTAGGAGGTGAGCAAATTCCACCCAAATATGATACGGGAATGTTTCGAACTTGGGACAACGATGATGGTTACATTTTCGGGGCCAACATAGGAATTCAACCCACTAATATGAGCATGCCAGTTTTGTATGCAGATAATATTCCAGCATATACTGCCCCAGCTGATATCTACCGCACATCCCGTTCAATGGCTCCCTTTGATGATGGCCTTGTCAATTTAAACTTCAACGAAACGTGGTCTTTTTCTGTTGATTCTGGCTTCAATTACCTAGTTAGGCTGCACTTCTGTGAAATTGACCACGATATAACTAAAGTCAATGAGGTAGTTTTTGTTGTGTTTTTAAATAATCAAACAGCTGATGAAGGTTTTGATCCAATTGCCTTGAGTGGGGGACCTGGAGTTGCTGTTTACCAAGATTATGTGGTGACGATTCCCGAAGATAGTGAGGGGAAGCAGGATCTGTGGCTAGATCTACATCCAAACAAGAAATTCAAACCTATGTACTATAATGCTTTCTTGAATGGTGTGGAGATTTTTAAATTGAGCAGTGTTGATGAGAAGAATCTTGCAGGGCTTAACCCTTCTAAAAGGAAGTCTGGATCAGATGTAAAGGCTTCTAATGTTTCGCCTTTTAAAAGCTCAAAGAAATTCACATTCATTCTCATTGGATGTGGGCTTGCTGCAGTGGTTCTACCAATTCTCCTCTGCTTAGTTCTATGCAGGTTGAAGGTGATTAGGCCTAGAAGGATCAAGTCATGTTGTGATCTCTTTGTGCTTACTCCTAATCAAATTGAAAAGAAAAGCAAGTCATCGTTTTGCTGTCATTTTTCAGTTGAAGAGATAAAAATGGCAACAAATGACTTCGATGAGGCTCTACTTATAGGCACTGGTGGATTTGGCAGTGTTTACAAGGGTAGTTTTGATGGTGGGGCAACTTCTGTGGCTATAAAACGTGCCAATCCAATGTCAGAACAAGGTATTATAGAATTTGAGACAGAGATCCATTTGCTCTCGCAGCTGCGGCATAACAACCTGGTCTCCCTTTTGGGTTACTGCAATGAAGATGGGGAGATGATATTGGTCTATGACTTCATGGCCAAAGGAAGTCTTTATGATCATCTTCATTTGAGGCAGAGAGATCAACCCCCTTTGTCATGGATTCAACGTCTTGAGATATGCATTGGAGTTGCAAGAGGTTTGCACTATCTACACACTGGCACAAAGCACAGGATCATTCACCGTGACATCAAGACAGCCAACATCCTCTTAGACCACAATTGGGTTCCCAAAATTTCAGATTTTGGGTTGTCTAAGGCAAGCTACCCTTCCTTAAGCACCACCAACATCAAGGGCAGCATTGGTTACCTAGATCCAGAGTACTATCAATGCCACAAGTTGACTGAGAAATCTGATATATACTCATTTGGGGTGGTGTTATTGGAGGTGCTAAGTGCAAGGCCTGCTCTTAGTCCCGATGAAGATGATGAGCATGTAAACTTGGCTGAATGGGCAGTGTTTTGCTTTGAGAATGGCAATGTAGAGCAAATAGTGGACCCCAGCTTAGAAGGAAACATAGTTAAGGATTGCTTTGAGTTATATTTAGGTGTTGCAATGAAATGTTTGGCTGAAAGAGGGGTGGAGAGGCCATCCACTGGTGATGTGCTGCAGAACCTTCTTGTGGCAATGCAACTTCAGAAAAATGCTGGTAGTGCCCGAAATGGAAATGTACATGGGAATGATAATAATGGTTTGCAGGGCTGTTCAGATTTGACACCTGGGGTAGAGTTCTCTGATATCATGATGCCTGTTGGTCGGTGA 2523 0.4094 MNAVVCSIYIFILNLYLLHLQLIVAADNYYASYVPSENIVLNCGSYTSELVQYDGRNWNGDIASPYLPSKFKSLTARAPTTLQSIPEVPYMTVRIFQSQFTYRFNVTPGPKFIRLHFYPASYLDLNISKAFLSLSAGNFTLLHNFSVSLNADYFNLAYFMKEFIVHVSGSTLELTFTPSSNASDAYAFVNGIEVVSMPLHLYTRGDDAPLPLVGHYPTLLYLYNDSALENMYRINVGGEQIPPKYDTGMFRTWDNDDGYIFGANIGIQPTNMSMPVLYADNIPAYTAPADIYRTSRSMAPFDDGLVNLNFNETWSFSVDSGFNYLVRLHFCEIDHDITKVNEVVFVVFLNNQTADEGFDPIALSGGPGVAVYQDYVVTIPEDSEGKQDLWLDLHPNKKFKPMYYNAFLNGVEIFKLSSVDEKNLAGLNPSKRKSGSDVKASNVSPFKSSKKFTFILIGCGLAAVVLPILLCLVLCRLKVIRPRRIKSCCDLFVLTPNQIEKKSKSSFCCHFSVEEIKMATNDFDEALLIGTGGFGSVYKGSFDGGATSVAIKRANPMSEQGIIEFETEIHLLSQLRHNNLVSLLGYCNEDGEMILVYDFMAKGSLYDHLHLRQRDQPPLSWIQRLEICIGVARGLHYLHTGTKHRIIHRDIKTANILLDHNWVPKISDFGLSKASYPSLSTTNIKGSIGYLDPEYYQCHKLTEKSDIYSFGVVLLEVLSARPALSPDEDDEHVNLAEWAVFCFENGNVEQIVDPSLEGNIVKDCFELYLGVAMKCLAERGVERPSTGDVLQNLLVAMQLQKNAGSARNGNVHGNDNNGLQGCSDLTPGVEFSDIMMPVGR 840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2183g00001 840 Gene3D - 227 417 - -
Gabi2183g00001 840 Gene3D - 38 198 - -
Gabi2183g00001 840 Pfam Malectin-like domain 41 415 IPR024788 -
Gabi2183g00001 840 CDD STKc_IRAK 529 793 - -
Gabi2183g00001 840 SUPERFAMILY Protein kinase-like (PK-like) 502 794 IPR011009 -
Gabi2183g00001 840 SMART serkin_6 523 795 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2183g00001 840 FunFam FERONIA receptor-like kinase 226 417 - -
Gabi2183g00001 840 FunFam Receptor-like protein kinase FERONIA 600 815 - -
Gabi2183g00001 840 ProSiteProfiles Protein kinase domain profile. 523 795 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2183g00001 840 FunFam receptor-like protein kinase FERONIA 493 599 - -
Gabi2183g00001 840 Gene3D Transferase(Phosphotransferase) domain 1 600 816 - -
Gabi2183g00001 840 Pfam Protein tyrosine and serine/threonine kinase 529 720 IPR001245 GO:0004672|GO:0006468
Gabi2183g00001 840 ProSitePatterns Protein kinases ATP-binding region signature. 529 552 IPR017441 GO:0005524
Gabi2183g00001 840 Gene3D Phosphorylase Kinase; domain 1 508 599 - -
Gabi2183g00001 840 FunFam FERONIA receptor-like kinase 38 198 - -
Gabi2183g00001 840 ProSitePatterns Serine/Threonine protein kinases active-site signature. 646 658 IPR008271 GO:0004672|GO:0006468
Gabi2183g00001 840 PANTHER OS03G0124300 PROTEIN-RELATED 12 478 IPR046957 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2183g00001 Gabi-Chr2183 10804 13326 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2183g00001 22 825 Receptor kinase-like Gene Family AT3G51550 49.700 0.0 758
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Gabi2183g00001 Malectin_like 3.6e-36 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2183g00001 - - gmx:100776859 1296.18