Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2179g00317 ATGAAGCTGCTGTGGGTGTTTGGGTTTATGGGGTTGGTGATTGTGAAATGTGTACAATGCTTCGAGAATGCTAATGTGACAGACATGCAATATGTTTGGGGAAGAGGTTTCTACAATAACAAACCTTTGATGGTTGGTCTTACTCTTATTAATGGTGCTGCTGCCAAAGGAGCTGTCTGCCTGGATGGATCTTTACCAGGTTATCACTTCCACCGTGGATATGGTTCGGGATCAAACAGTTGGCTCATACAATTGGAGGGAGGAGGCTGGTGTGGAACTATTGGAAATTGTGCTTACGGTAAGAAAACACGTCATGGTTCATCCATATTTATGGAAAAACAAATACCATTTATTGGGATATTGAGCAACAAAGCTGCGGAAAACCCAGATTTCTTCAATTGGAATCGAATAAAAATTCGTTATTGTGATGGTGCATCATTTAGTGGGGACAGTCAAAATAAGGCAGCAGGGTTATATTTTAGAGGGCAACGTATCTGGCAAGCTGCTATGGAAGATTTAATGTCAAAAGGGATGCGCTATGCCAAACAGGCTCTTCTATCTGGATGTTCTGCAGGAGGTTTAGCTGCGATACTACATTGTGATGAATTTCGGGAATTGTTTCCTAGAACCACAAGAGTAAAGTGCTTAAGTGATGCTGGATTATTCCTTGATGCTATTGATGTATCCGGCCGTCGCAGTTTAAGGAATATGTTCAGCAGTGTGGTCACCTTACAGGGAGTGCAAAAGAACCTTCCAAGGAGTTGTACAAGTCGCCTCAACCCAATTTTGTGCTTTTTCCCTCAGCACTCAATTGCCAGTGTTAGGACACCACTGTTTCTTCTCAATGCAGCTTATGATACTTGGCAGATTCAAGCCAGCCTAGCTCCGCCATCTGCTGACTATCATTGGAATTGGATTGAATGCAGAAAGAATTATGCACGTTGCAGTGCACCACAGATACAGTATCTGCAAGGTTTTCGAAATCAGATGCTCGGAGTTGTAAGAGGTTTCTTAAGGTCTCGAAAAAACGGGTTATTCATAAATTCATGTTTTGCTCATTGCCAAGCTGAAAGACAGGATACATGGTTTTCTCAGGATTCTCCTCATATTGGAAATAGAGGAATCGCAGAGTCTGTTGGGAACTGGTTTTTTGACCGAGTTGGTGTCCAGGCTATTGGTTGCCCTTACCCTTGTGACAAAACCTGCCATAATTTGGTTTTCAAGTGA 1227 0.4254 MKLLWVFGFMGLVIVKCVQCFENANVTDMQYVWGRGFYNNKPLMVGLTLINGAAAKGAVCLDGSLPGYHFHRGYGSGSNSWLIQLEGGGWCGTIGNCAYGKKTRHGSSIFMEKQIPFIGILSNKAAENPDFFNWNRIKIRYCDGASFSGDSQNKAAGLYFRGQRIWQAAMEDLMSKGMRYAKQALLSGCSAGGLAAILHCDEFRELFPRTTRVKCLSDAGLFLDAIDVSGRRSLRNMFSSVVTLQGVQKNLPRSCTSRLNPILCFFPQHSIASVRTPLFLLNAAYDTWQIQASLAPPSADYHWNWIECRKNYARCSAPQIQYLQGFRNQMLGVVRGFLRSRKNGLFINSCFAHCQAERQDTWFSQDSPHIGNRGIAESVGNWFFDRVGVQAIGCPYPCDKTCHNLVFK 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2179g00317 408 PANTHER NOTUM-RELATED 33 404 IPR004963 GO:0016787
Gabi2179g00317 408 Pfam Pectinacetylesterase 39 386 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2179g00317 Gabi-Chr2179 2938778 2947905 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2179g00317 37 408 Carbohydrate Esterase AT1G57590 70.699 0.0 563
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2179g00317 K19882 - gmx:100791571 756.903