Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2179g00296 ATGGCATTTCAGGATTTCGACCTCATCTCAGAACGGCGAAGAAATGAGAAGAAACAAAAGCTGAGGAAGAAGATCCTCATTATTGTTGTTTCTTCCGTTGTCCTTGTTGGTCTCATTGGTGCTGCATTCTTTGTTGCTGCCACTAAATATGGCTTTGGTAAGGATGAGAAAAATGCTCCAACTTCTTCCACCAGCAACAAGCATGAGCACGTTTCACATTCTGAAAAGATTGTGACATTGGTATGCAGCTCCGCAGATTACAAAGACAAATGTGAAGGTCCACTTAACAAGGCAGTGCAGGATGACCCTAAACTCACACATCCCAAAGACCTTCTCAAAATCTATGTCAAATTTGCTGAGGATGAGGTTAACAAGGCCTTCAATAAAACCAACTCATTCAAGTTTCAATCTGAGGAAGAGAAAGGAGCTTTTGAAGATTGCAAGCAGCTATTTCAGGATGCCAAGGATGATTTAGAAACATCCATCTCTGAACTTAGCAAAATTGATTTCAAGAAACTTTCCTCAAAAACTCCTGATCTGAACAGTTGGCTCAGTGCTGTCATCTCTTTCCAACAAACCTGTGTTGATGGTTTCCCTGAAGGAAAATTGAAGACTGATCTTGAAAATCTCTTCAAGGATTCCAAGGAATTCGTTAGCAATTCACTTGCCATTGTGTCTCAAGTGACCTCATTCCTTTCTACATTCCAAACATTTGCACGTAGTCGTTCCTTGCTTTCAGAGAATTCAAACTCCCTAGTTGCTTCTTTGGACAAAATCGATGGCCTTCCTTCTTGGATGAACCCCGAGGACCGAAGGATATTGAAGGCTGTTGATAACAAACCTAAACCTAATGTCATTGTTGCAAAAGATGGCAGTGGTGACTTCAAAACCATCTCTGAAGCTTTAGCAGCCATCCCTAAAAACTATCAAGGACGGTATGTGGTTTATGTTAAAGAAGGAGTATACGATGAGACAGTGACAGTAGCAAGGGAAATGCAAAATGTAACCATGTATGGTGATGGATCACAAAAGAGTATCATCACTGGCAACAAAAACTTTAGGGACGGAGTCAGGACTTTCCAAACTGCAAGTTTTGTGGTACTAGGAGATGGATTCGTTGGCCTAGCAATGGGATTCAGAAACACTGCTGGTCCTGAAGGGCATCAAGCAGTGGCTGCAAGAGTTCAAGCAGATCGTGCAGTGTTTTCAAACTGTCGCTTTGAGGGTTACCAAGACACCCTATATGCACAAACCCATAGACAATTCTACCGCAGTTGTATCATTTCAGGAACCATTGATTTCATCTTTGGTGATGCAGCTTCTGTGTTCCAGAACTGTATCATGGTTGTTAGGAAACCATTGGACAATCAGCAGAACATGGTAACTGCTCAAGGGAGAATGGACAAGCAACAAGCCACTGGAATTGTTCTTCAAAAATGTACCATTAAAGCTGATGACTCATTGGTTCCTGTTAAAGACAAAATCAGGAGCTACCTTGGTAGGCCTTGGAAGGAGTACTCAAGAACCATTGTTATGGAATCAGAAATAGGTGATTTGATTCACCCTGATGGATGGACAGCTTGGGCAGGTGACTTTGCACTCAATACACTGTATTATGCAGAGTACAACAACACAGGACCTGGTGCAAGCACCACTGCTAGGGTCAAGTGGCAAGGCTACAAAGTCATTAACAAGGAAGAGGCTACAAAGTACACTGTAAGTTCTTTCTTGAAAGGAAATTGGGTCCAGAGCTCAAGTGTGCCAGCTGTTCAGGGCTTGTACTATAATTAA 1791 0.4216 MAFQDFDLISERRRNEKKQKLRKKILIIVVSSVVLVGLIGAAFFVAATKYGFGKDEKNAPTSSTSNKHEHVSHSEKIVTLVCSSADYKDKCEGPLNKAVQDDPKLTHPKDLLKIYVKFAEDEVNKAFNKTNSFKFQSEEEKGAFEDCKQLFQDAKDDLETSISELSKIDFKKLSSKTPDLNSWLSAVISFQQTCVDGFPEGKLKTDLENLFKDSKEFVSNSLAIVSQVTSFLSTFQTFARSRSLLSENSNSLVASLDKIDGLPSWMNPEDRRILKAVDNKPKPNVIVAKDGSGDFKTISEALAAIPKNYQGRYVVYVKEGVYDETVTVAREMQNVTMYGDGSQKSIITGNKNFRDGVRTFQTASFVVLGDGFVGLAMGFRNTAGPEGHQAVAARVQADRAVFSNCRFEGYQDTLYAQTHRQFYRSCIISGTIDFIFGDAASVFQNCIMVVRKPLDNQQNMVTAQGRMDKQQATGIVLQKCTIKADDSLVPVKDKIRSYLGRPWKEYSRTIVMESEIGDLIHPDGWTAWAGDFALNTLYYAEYNNTGPGASTTARVKWQGYKVINKEEATKYTVSSFLKGNWVQSSSVPAVQGLYYN 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2179g00296 596 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 76 229 IPR035513 -
Gabi2179g00296 596 Gene3D Invertase/pectin methylesterase inhibitor family protein 74 229 IPR035513 -
Gabi2179g00296 596 ProSitePatterns Pectinesterase signature 2. 428 437 IPR033131 -
Gabi2179g00296 596 Pfam Pectinesterase 284 580 IPR000070 GO:0030599|GO:0042545
Gabi2179g00296 596 Gene3D - 278 593 IPR012334 -
Gabi2179g00296 596 NCBIfam pectinesterase inhibitor domain 67 228 IPR006501 GO:0004857
Gabi2179g00296 596 FunFam Pectinesterase 74 229 - -
Gabi2179g00296 596 SMART PMEI_2 73 224 IPR006501 GO:0004857
Gabi2179g00296 596 CDD PMEI-like_3 80 230 - -
Gabi2179g00296 596 PANTHER PECTINESTERASE 36 583 - -
Gabi2179g00296 596 Pfam Plant invertase/pectin methylesterase inhibitor 78 224 IPR006501 GO:0004857
Gabi2179g00296 596 SUPERFAMILY Pectin lyase-like 281 583 IPR011050 -
Gabi2179g00296 596 FunFam Pectinesterase 278 593 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2179g00296 Gabi-Chr2179 2785619 2787982 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2179g00296 1 594 Carbohydrate Esterase AT2G26450 48.166 0.0 592
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2179g00296 - - gmx:100784679 896.345