Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2179g00295 ATGGCATCAAGAAAAGCTCTGAATCACATCCTGGTTCTGCCAATCTTGCTGATGAATTGCTTTGTTTTGCAAAACACACAAGAGGTAGAAGATTTTGTTACTGCAACCTGCAAGCACACCCTTCATTTTCAAACATGCGTTTCTTCCTTAAGATCGGTTCCTAGTAGCAAGACATCACATCTCAAAGGGCTTGCTGAGATTGCATTAAATCTGAGCACAACATATGCTACAAAGACTTTGTCCTATGTTTATGAGCTGAAGTCCTCTGCTGCCAGTGGCACCAATAACAATTACACGTCAAGTTGCTTAAGTGACTGCGTAGAGGAATACTCAGAAGCCATAGAGAATTTGAAGGACTCAGCAGAAGCACTTGCCAATGGAGAATATGACACAGTTGATACATTGGTCTCGGCTGCTATGTCAGATGCTGAGACATGTGAGGATGGCTTCAAGGACATGCTCAGCGATGACAATGCTTCAAACTCTCCTCTTACCGAGCGAAACTGCTACTTCTCTGAGCTGTGTAGCAATGCTCTAGCCATTACAAAACTATTAGTTTGA 561 0.4278 MASRKALNHILVLPILLMNCFVLQNTQEVEDFVTATCKHTLHFQTCVSSLRSVPSSKTSHLKGLAEIALNLSTTYATKTLSYVYELKSSAASGTNNNYTSSCLSDCVEEYSEAIENLKDSAEALANGEYDTVDTLVSAAMSDAETCEDGFKDMLSDDNASNSPLTERNCYFSELCSNALAITKLLV 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2179g00295 186 Coils Coil 107 127 - -
Gabi2179g00295 186 FunFam Invertase/pectin methylesterase inhibitor family protein 28 186 - -
Gabi2179g00295 186 Gene3D Invertase/pectin methylesterase inhibitor family protein 28 186 IPR035513 -
Gabi2179g00295 186 Pfam Plant invertase/pectin methylesterase inhibitor 31 181 IPR006501 GO:0004857
Gabi2179g00295 186 CDD PMEI-like_1 32 185 - -
Gabi2179g00295 186 NCBIfam pectinesterase inhibitor domain 9 185 IPR006501 GO:0004857
Gabi2179g00295 186 PANTHER PECTINESTERASE INHIBITOR-LIKE 11 185 - -
Gabi2179g00295 186 SMART PMEI_2 28 181 IPR006501 GO:0004857
Gabi2179g00295 186 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 31 185 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2179g00295 Gabi-Chr2179 2783564 2784124 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2179g00295 33 183 Carbohydrate Esterase AT1G53830 26.415 4.06e-09 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2179g00295 - - gmx:100785210 270.396