Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2179g00280 ATGGCTCAGAAGAAATTTGGTCACGTTGAAACTAAGGCGACATTATTGGGTGCAGTTACAGTACTAGCTCTCCACCTTATAATTCCAGAAACCATTTTCCTCGTGAGAGGGCATGCACACCAAACGGACGGCGCCGTTAGAATCGTCAGGGTTCGAAAGGACGGTGGGGGAGACTTTAGGACTGTGACGGACGCCGTTAACAGCATTCCGTCAGGGAACAAGGGGCGAGTGGTGGTGTGGATCGGCGTGGGAGAGTATCGCGAGAAGATCACAGTGGATAGGTCGAAGCCGTTCGTTACGTTTTATGGAGAAAGCAATGGGAACGACGACGACATGGCCACCATAACCTACGACGGAACAGCGTTGCAGTATGGGACAGTTGATAGCGCCACCGTTGCTGTTGACGCTGACTATTTTGTGGCTGCCAATGTAGCATTTGTGAACTCGTCTCCTATGCCAGATGAAAATAGTGTTGGAGCACAAGCGTTAGCGATGAGGATATCAGGGGACAAGGCTGCATTCTACAACTGCAAGTTTATTGGCTTTCAAGATACCTTATGTGATGACAGAGGCAGGCATTTTTTCAGGGACTGCTACATCCAAGGCACCTATGATTTCATCTTTGGAAATGGAAAATCCCTCTACTTGAGAACTACCATACATTCTGTTGCAAAGGGTTTGAGTGTTATCACAGCACAAGGTAGGGAAAGCACGTCAGAAGACACTGGATTCACTTTTGTGCATTGCAACATAACCGGAAGTGGTGACAGGAACACTTACCTTGGTCGTGCTTGGAAGGAGAGCCCCAGGGTGGTTTTTGCCTACACGTACATGGGTTCCCTCATTAATAACCGAGGATGGTTCACAAACGAACTTGCTCGAGTCAAACCTAATCAGACAATATATTATGGAGAATATAGGTGCATGGGACCAGGAGCTGCTTCCTCTGGGCGCGTAAAATTTCGCAAGATATTATCTGATGAAGAAGCAAAGCCCTTCTTGAGCATGGCTTATATTCATGGAGGAAAGTGGGTTGTCCCACCTCCCAAGCTGTGA 1056 0.4782 MAQKKFGHVETKATLLGAVTVLALHLIIPETIFLVRGHAHQTDGAVRIVRVRKDGGGDFRTVTDAVNSIPSGNKGRVVVWIGVGEYREKITVDRSKPFVTFYGESNGNDDDMATITYDGTALQYGTVDSATVAVDADYFVAANVAFVNSSPMPDENSVGAQALAMRISGDKAAFYNCKFIGFQDTLCDDRGRHFFRDCYIQGTYDFIFGNGKSLYLRTTIHSVAKGLSVITAQGRESTSEDTGFTFVHCNITGSGDRNTYLGRAWKESPRVVFAYTYMGSLINNRGWFTNELARVKPNQTIYYGEYRCMGPGAASSGRVKFRKILSDEEAKPFLSMAYIHGGKWVVPPPKL 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2179g00280 351 Gene3D - 47 348 IPR012334 -
Gabi2179g00280 351 Pfam Pectinesterase 50 341 IPR000070 GO:0030599|GO:0042545
Gabi2179g00280 351 SUPERFAMILY Pectin lyase-like 48 345 IPR011050 -
Gabi2179g00280 351 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 38 345 - -
Gabi2179g00280 351 FunFam Pectinesterase 44 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2179g00280 Gabi-Chr2179 2595363 2598038 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2179g00280 43 351 Carbohydrate Esterase AT5G07410 52.427 1.01e-121 353
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2179g00280 K01051 - gmx:100790786 558.91