Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2179g00279 ATGGAGGATGATGGAGGATACAAATTTACTGGAATTAGACAGATTGTGAGACTAAAGGAAATGTTTCAGAAGTGGCAAACTGTCACCCTGGGTGCAAAAGAGTCCGATAAACATTCTGATGTGAATCATGTGGGCATATCACCGATAGTTAACAAAAGGCTAACAAATGTTGTGTATTGTGACTCGGATGAGGATAGCTGCCACAGTCCTCAACCCCCTCATGATGTTCCCAAAGGATACTTAGCTGTCTATGTTGGGTCAGAGCTTCGGCGTTTCATTATTCCCACCAGCTACCTTAGCCACTCTCTGTTCAAAGTGTTGCTGGAAAAGGCTGCAGAGGAATTTGGGTTTGACCAGAGTGGGGGGCTTACAATCCCATGTGATATTGAGACATTTAAATACCTCCTGAACTGCATGGAGAACCATCATAGAGCACCATGA 441 0.4422 MEDDGGYKFTGIRQIVRLKEMFQKWQTVTLGAKESDKHSDVNHVGISPIVNKRLTNVVYCDSDEDSCHSPQPPHDVPKGYLAVYVGSELRRFIIPTSYLSHSLFKVLLEKAAEEFGFDQSGGLTIPCDIETFKYLLNCMENHHRAP 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2179g00279 146 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 58 135 IPR003676 GO:0009733
Gabi2179g00279 146 Pfam Auxin responsive protein 62 138 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2179g00279 Gabi-Chr2179 2589670 2592178 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2179g00279 1 142 Calmodulin-binding Proteins AT5G20810 68.000 2.33e-70 208
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2179g00279 K14488 - gmx:100795275 254.218