Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2179g00271 ATGCAAACACATCGATATAACACTCTCTCGCACACGCTCTCCGCTTTCTTGCTCTTCTTCCTGTCTCCGCCACTTTTGTCTTGCGCCGCCGCACCGGCGACACAGCAAGATCTGCTACTTCGTTCATCGTGCGCTCAGGCCCGGTACCCCAACCTATGCGTCCAAACTCTGTCCAACTCCGCAGGTCCCGCCATGAAGCCCTTGGATCTGGCTCAAGCCGCTGTTAGGGTTAGCCTCGCTCACGCTCGCACCCTCTCCGGTTACCTCAAGAACCTGCAGTTACAAGCAAAGTCAGGGTCCAGTAACTGGCAGCGAGGTGCGGTGAGTGACTGCGTGGCGCAGATTTCCGACTCGGTGAACGAGTTGAGCAACACGTTGAACGAGTTACAGCACCTGCAGATGGGAAAGTTCGAGTGGCATATGAGCAACGCCCAGACATGGATCAGCACCGCCATGACCGACGGCCAATCCTGCCTCAACGGCTTCAAAGACGGCAACGTCGAAGGGAAACTCAAATTGGACGTGAACCGTAGGGTAACGGGTGTAGCTATGCTCACCAGCAACGCCTTGTACCTGATCAATCGCCTTGGTGCTAGCAGGAATGGGAAGCCTCGCTCCAATTCCAAAACACACTTCTGA 639 0.5556 MQTHRYNTLSHTLSAFLLFFLSPPLLSCAAAPATQQDLLLRSSCAQARYPNLCVQTLSNSAGPAMKPLDLAQAAVRVSLAHARTLSGYLKNLQLQAKSGSSNWQRGAVSDCVAQISDSVNELSNTLNELQHLQMGKFEWHMSNAQTWISTAMTDGQSCLNGFKDGNVEGKLKLDVNRRVTGVAMLTSNALYLINRLGASRNGKPRSNSKTHF 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2179g00271 212 Pfam Plant invertase/pectin methylesterase inhibitor 39 191 IPR006501 GO:0004857
Gabi2179g00271 212 CDD PMEI-like_3 42 196 - -
Gabi2179g00271 212 NCBIfam pectinesterase inhibitor domain 12 196 IPR006501 GO:0004857
Gabi2179g00271 212 PANTHER PECTINESTERASE INHIBITOR-LIKE 16 192 - -
Gabi2179g00271 212 FunFam Pectinesterase inhibitor 3 35 197 - -
Gabi2179g00271 212 Gene3D Invertase/pectin methylesterase inhibitor family protein 36 197 IPR035513 -
Gabi2179g00271 212 Coils Coil 112 132 - -
Gabi2179g00271 212 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 39 196 IPR035513 -
Gabi2179g00271 212 SMART PMEI_2 35 192 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2179g00271 Gabi-Chr2179 2532404 2533042 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2179g00271 39 196 Carbohydrate Esterase AT3G14310 27.329 3.36e-15 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2179g00271 - - mtr:25494163 206.453