Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2179g00264 ATGGTGAAGCCGACCATTGGAAAACCCGAGGAGCAAAGCGAATCAAAGTACAGAGGGGTCCGAAAGAGGAAGTGGGGCAAATGGGTATCCGAAATAAGACTACCCAACAGCCGCCAGAGGATTTGGTTGGGATCCTACGACACTGCCGAGAAGGCGGCGCGTGCTTTCGACGCCGCCATGTTCTGCTTACGTGGCCGCAACGCTAGGTTTAATTTCCCTGATAACCCGCCCGATATCGCCGGCGGCAGGTCCATGACTCCCTCACAAATTCAGGCCGCCGCATCCCGTTTTGCCAACTCGGAGCCCCACGAGGGACATTCGGGTCGACCCGCTTCCACCGAATCGCCCGTGGGATGTTCGTCGGAGGGCACAATTTTGCATACTGAATCTCCGTCGCCTTCTCTCTCGGAGGGGACTGTCCAAACGGACAGTGACATCACCATGAACGGTTCGTTTCCGGATTTGTTCACCCCGATCGGGTCGAGTAGTCATGCATCCGATTATGAGATTTTTCCGGGTTTTGATGATTTTAGCGGTAATTTCTACGTGCCCGAAATGCCAAATGTTAATTATGGAGAAGAAAACATGGATGGATTGATAGTTGATGACTCTTTCTTGTGGAATTTCTGA 630 0.5238 MVKPTIGKPEEQSESKYRGVRKRKWGKWVSEIRLPNSRQRIWLGSYDTAEKAARAFDAAMFCLRGRNARFNFPDNPPDIAGGRSMTPSQIQAAASRFANSEPHEGHSGRPASTESPVGCSSEGTILHTESPSPSLSEGTVQTDSDITMNGSFPDLFTPIGSSSHASDYEIFPGFDDFSGNFYVPEMPNVNYGEENMDGLIVDDSFLWNF 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2179g00264 209 Gene3D AP2/ERF domain 15 74 IPR036955 GO:0003700|GO:0006355
Gabi2179g00264 209 MobiDBLite consensus disorder prediction 1 20 - -
Gabi2179g00264 209 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 12 127 - -
Gabi2179g00264 209 SUPERFAMILY DNA-binding domain 15 74 IPR016177 GO:0003677
Gabi2179g00264 209 PRINTS Ethylene responsive element binding protein signature 17 28 IPR001471 GO:0003700|GO:0006355
Gabi2179g00264 209 PRINTS Ethylene responsive element binding protein signature 39 55 IPR001471 GO:0003700|GO:0006355
Gabi2179g00264 209 MobiDBLite consensus disorder prediction 113 144 - -
Gabi2179g00264 209 MobiDBLite consensus disorder prediction 82 96 - -
Gabi2179g00264 209 CDD AP2 15 75 IPR001471 GO:0003700|GO:0006355
Gabi2179g00264 209 Pfam AP2 domain 15 65 IPR001471 GO:0003700|GO:0006355
Gabi2179g00264 209 MobiDBLite consensus disorder prediction 74 144 - -
Gabi2179g00264 209 FunFam Ethylene-responsive transcription factor 2 15 74 - -
Gabi2179g00264 209 ProSiteProfiles AP2/ERF domain profile. 16 73 IPR001471 GO:0003700|GO:0006355
Gabi2179g00264 209 SMART rav1_2 16 79 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2179g00264 Gabi-Chr2179 2433689 2434344 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2179g00264 14 209 AP2-EREBP Transcription Factor Family AT1G19210 48.293 3.02e-57 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Gabi2179g00264 AP2 7.1e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2179g00264 - - gmx:732656 329.331