Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2179g00250 ATGGTCTTGGCAGCCAAGAAGACATACATAGTCCAGATGAAACACCAACACGATTCCTCCAAATACCCCACCCACCATGACTGGTACTCTTCCATTCTTCACTCTTCTGATTCCCTGCTTTATGCCTACACAACCGCTTACAACGGTTTTGCAGCTACCCTTGACCCCCAACAACTCCACGCATTGCGCAATTCCGACTCAGTTGTGGGAGTGTACGAGGACACCCTTTACACGCTCCACACAACCCGCACCCCTGAGTTTTTGGGCCTCCAAGCCCATTCGGGTTTGTTGGAAGACCTTTATCAAGCTTCGCACGACGTCGTTATTGGGGTACTCGACACAGGTGTTTGGCCAGAATCCCAGAGCTTCCATGACTCCCAAATGCCCCAAATCCCAACGCGATGGCGCGGCCACTGTGAATCCGCTCTTGATTTTAATCCTTCTCTCTGCAACAACAAGCTCATCGGTGCTCGCAGCTTCTCCAGGGGCTACCTCATGGCCTCTGGCGGCGGTTACATCAGGAAAGCAAGAGAGCCTGCTTCGCCTCGCGATCGAGACGGCCACGGCACCCATACCGCCACCACCGCTGCAGGCTCCGCCGTCGATAATGCCAACTTGCTCGGTTACGCCACCGGCACCGCACGCGGGATGGCACCTCAGGCTCGCTTGGCTGCCTACAAGGTCTGCTGGACAGACGGCTGCTACGCCTCCGACATACTCGCCGGCATGGATCAAGCAATCCAGGACGGCGTCGACGTGCTCTCGCTCTCCCTTGGCGGCTCCCAAGCCCCGTACTACCGCGACACCATCGCAATCGGAGCATTCGCGGCGGTGGAGAGGGGAATCTTCGTTTCGTGTTCGGCTGGGAACAGCGGACCTCGCAGCGGCTCCGTGGCAAATGTGGCTCCGTGGATCATGACCGTGGGAGCAGGGACGTTGGACCGGGATTTTCCGGCGTATGCTATGCTCGGGAATGGGAAACATTTCGCCGGCGTTTCTCTTTACAGCGGAGGAGGGATGGGTGACGAGCCGGTTGGTTTGGTTTATTTTGACGAAAAAACCAACTCCTCCAGCAGCATTTGCATGCCCGGTTCACTCGACCCGGAGATCGTGCGTGGGAAGGTGGTAGTTTGTGACAGGGGACTAAATGCACGTGTGGAGAAAGGTGCGGTTGTGCGCGACGCGGGCGGAGTTGGGATGATACTGGCAAACACGGCGGCGAGCGGTGAGGAACTGGTGGCAGACAGTCACTTGGTACCGGCAATGGCAGTTGGGAGAAGCGGTGGTGATGAGATCAGAGAGTATGCAGCATCTGATCCTAATCCAACGGCTGTAATGAGGTTTGGTGGAACTGTGTTGAACGTGAAGCCGTCGCCTGTGGTTGCAGCATTCAGCTCAAGAGGACCCAATGGAATAACGCCTCAGATACTGAAACCCGATGTTATTGGGCCTGGTGTTAACATCTTAGCCGCATGGACTGACGCTGTTGGCCCATCTGGATATCAGGACACTCGCAAAACCCACTTCAACATCTTATCTGGTACGTCCATGTCTTGTCCACATATAAGTGGGTTAGCTGCATTACTTAAAGCAGCTCATCCAGATTGGAGTCCAAGTGCAATCAAATCTGCACTCATGACAACGGCCTATACTCATGACAACACCGACTCTCCTCTCAGGGATGCAATGGGTGAAGCCTTCTCCACACCATGGGCTTATGGTGCTGGTCATGTCAACCCACTAAAGGCCCTCTCTCCTGGCCTTGTCTATGATGCCTCCACCCAGGATTACATTGCCTTCTTGTGCTCCTTGGACTACAACCCCCAACATCTACAACTTATTGTCAAGCGTCCCCAGGTTAATTGTTCTATGAAATTTACTGACCCGGGTGAACTCAATTACCCTTCGTTCTCGGTCGTGTTTGGAAGCAACAGGGTTGCTCGATACACACGCACATTGACCAACGTTGGACCTCCAGGATCTGTCTATGATGTGGCTGTGAACGGACCATCCATGGTGGGGATAACGGTGAATCCTACCAGGCTTGTGTTCCGAGAAGTAGGGGAAAGGCAAACTTACACAGTGAGCTTTGAATCCAAGAGGGATGTTGATGATTCGGTTACGTCTGAATTTGGTAGCATTATGTGGAGCAATGAACAAAGCCAAGTTAGGAGCCCAGTTGCTTTTGCGTGGACAGATTCATGA 2205 0.5374 MVLAAKKTYIVQMKHQHDSSKYPTHHDWYSSILHSSDSLLYAYTTAYNGFAATLDPQQLHALRNSDSVVGVYEDTLYTLHTTRTPEFLGLQAHSGLLEDLYQASHDVVIGVLDTGVWPESQSFHDSQMPQIPTRWRGHCESALDFNPSLCNNKLIGARSFSRGYLMASGGGYIRKAREPASPRDRDGHGTHTATTAAGSAVDNANLLGYATGTARGMAPQARLAAYKVCWTDGCYASDILAGMDQAIQDGVDVLSLSLGGSQAPYYRDTIAIGAFAAVERGIFVSCSAGNSGPRSGSVANVAPWIMTVGAGTLDRDFPAYAMLGNGKHFAGVSLYSGGGMGDEPVGLVYFDEKTNSSSSICMPGSLDPEIVRGKVVVCDRGLNARVEKGAVVRDAGGVGMILANTAASGEELVADSHLVPAMAVGRSGGDEIREYAASDPNPTAVMRFGGTVLNVKPSPVVAAFSSRGPNGITPQILKPDVIGPGVNILAAWTDAVGPSGYQDTRKTHFNILSGTSMSCPHISGLAALLKAAHPDWSPSAIKSALMTTAYTHDNTDSPLRDAMGEAFSTPWAYGAGHVNPLKALSPGLVYDASTQDYIAFLCSLDYNPQHLQLIVKRPQVNCSMKFTDPGELNYPSFSVVFGSNRVARYTRTLTNVGPPGSVYDVAVNGPSMVGITVNPTRLVFREVGERQTYTVSFESKRDVDDSVTSEFGSIMWSNEQSQVRSPVAFAWTDS 734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2179g00250 734 FunFam Subtilisin-like protease SBT1.5 106 324 - -
Gabi2179g00250 734 SUPERFAMILY Subtilisin-like 79 588 IPR036852 GO:0004252|GO:0006508
Gabi2179g00250 734 Gene3D - 601 731 - -
Gabi2179g00250 734 Gene3D Peptidase S8/S53 domain 106 597 IPR036852 GO:0004252|GO:0006508
Gabi2179g00250 734 FunFam Subtilisin-like protease SBT1.5 601 732 - -
Gabi2179g00250 734 ProSitePatterns Serine proteases, subtilase family, serine active site. 514 524 IPR023828 -
Gabi2179g00250 734 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 3 80 IPR037045 -
Gabi2179g00250 734 Pfam Fibronectin type-III domain 631 728 IPR041469 -
Gabi2179g00250 734 Gene3D - 314 453 - -
Gabi2179g00250 734 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 9 728 IPR045051 -
Gabi2179g00250 734 Pfam PA domain 369 432 IPR003137 -
Gabi2179g00250 734 MobiDBLite consensus disorder prediction 176 195 - -
Gabi2179g00250 734 PRINTS Subtilisin serine protease family (S8) signature 104 123 IPR015500 -
Gabi2179g00250 734 PRINTS Subtilisin serine protease family (S8) signature 184 197 IPR015500 -
Gabi2179g00250 734 PRINTS Subtilisin serine protease family (S8) signature 513 529 IPR015500 -
Gabi2179g00250 734 CDD Peptidases_S8_3 77 550 IPR034197 -
Gabi2179g00250 734 FunFam Subtilisin-like protease SBT1.9 1 80 - -
Gabi2179g00250 734 FunFam subtilisin-like protease SBT1.5 314 453 - -
Gabi2179g00250 734 SUPERFAMILY Protease propeptides/inhibitors 7 78 - -
Gabi2179g00250 734 ProSiteProfiles Serine proteases, subtilase domain profile. 84 584 - -
Gabi2179g00250 734 Pfam Peptidase inhibitor I9 8 80 IPR010259 -
Gabi2179g00250 734 CDD PA_subtilisin_like 323 444 - -
Gabi2179g00250 734 Pfam Subtilase family 105 552 IPR000209 GO:0006508|GO:0008236
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2179g00250 Gabi-Chr2179 2303058 2305345 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2179g00250 5 731 Subtilisin-like Serine Gene Family AT2G05920 68.587 0.0 1033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2179g00250 - - gmx:100786523 1205.66