Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2179g00249 ATGAAAATCACATGGAGATCGCTCTTCCCCAGTTGTTATAAGGGCGAGTACCCCTCACCCAAGCCCAAGAAAGTGGCGGCCACAAAGAGTAGTTCTTTTAACCGGATCTCTGTCACGGATCTGAGTTTTCCAAGCGCCGGCACGCTTTCAGAGGATCTTTCCATTTCTCTAGCAGGTTCTAACCTGTATGTTTTCTCACTCGCTGAGCTCAAGATTATCACCCAGAGCTTCTCCTCGAGTAACTTTCTCGGAGAAGGAGGGTTCGGACCCGTGCATAAGGGGTTCATTGATGACAAGCTCAGGCCTGGTCTCAAGGCTCAGCCGGTAGCTGTTAAGCTCTTGGACTTGGATGGCTCTCAGGGTCATAAAGAGTGGTTGACTGAAGTTGTGTTTCTGGGTCAACTAAGGCACCCACACCTTGTGAAGCTGATTGGATATTGCTGTGAAGAAGAACACAGGCTACTTGTATATGAGTATTTACCACGAGGCAGCTTAGAGAATCAGCTATTTAGAAGATACTCGGCTTCATTGCCATGGTCAACAAGAATGAAAATTGCTGTTGGAGCTGCAAAGGGTGTAGCCTTTCTGCATGAAGCAAAGAAACCAGTCATCTATAGAGATTTCAAAGCTTCAAACATCTTGTTAGACGCTGACTATAATGCAAAGCTCTCTGATTTTGGCTTGGCAAAAGATGGTCCCGAAGGAGATGACACACATGTTTCAACTAGAGTTATGGGCACCCAAGGCTATGCGGCCCCAGAATACATCATGACAGGACACTTGACAGCTATGAGTGATGTGTATAGCTTTGGAGTTGTCCTTTTAGAGCTGATAACTGGGAGAAGGTCAGTGGACAAGGGGCGCCCACAAAGAGAGCAGAACCTAGTGGAATGGGCCAGGCCAGTACTGAATGATTCAAGGAAACTTTGCCGTATAATGGATCCAAGACTTGATGGTCAGTATTCTGAGATGGGGGCAAGAAAAGCAGCTGCATTGGCTTATCAATGCCTCAGCCACAGGCCAAGGAATAGACCTTCAATGACAACAGTGGTCAAGACTCTTGAGCCTCTAGAGGATTTTGATGAGATTCCAATTGGACCCTTTGTTTACACGGTTCCAACTGATAATAATGAAGTGCATAAAGATGCAAAAGAAAGTGAAACACCTAAGGAGAGGAAGAGGGAGAATGGTCATCATCATCACCGGAGTCACCCTGGCCATAAGAATCCTGATAATAATGAAGTGCATACAGATGCTAAAGAATATGAAGCACCCAAGGAGAGGAAGAGGGAAAATAATGGACACCATCACAGGAGTCACCATCGCCACAATGGCCATAAGCATCCACTTAGATCGCCCAAGTCACCAAACTCACAGTCACATAATGATGAACACCGAAATGGTAGAAGAAGTGAGTCAAGCTCACCTGACGCCTTCATTGAATCACAAAGGCAAGAAAGCATAGCTTAG 1470 0.4592 MKITWRSLFPSCYKGEYPSPKPKKVAATKSSSFNRISVTDLSFPSAGTLSEDLSISLAGSNLYVFSLAELKIITQSFSSSNFLGEGGFGPVHKGFIDDKLRPGLKAQPVAVKLLDLDGSQGHKEWLTEVVFLGQLRHPHLVKLIGYCCEEEHRLLVYEYLPRGSLENQLFRRYSASLPWSTRMKIAVGAAKGVAFLHEAKKPVIYRDFKASNILLDADYNAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYIMTGHLTAMSDVYSFGVVLLELITGRRSVDKGRPQREQNLVEWARPVLNDSRKLCRIMDPRLDGQYSEMGARKAAALAYQCLSHRPRNRPSMTTVVKTLEPLEDFDEIPIGPFVYTVPTDNNEVHKDAKESETPKERKRENGHHHHRSHPGHKNPDNNEVHTDAKEYEAPKERKRENNGHHHRSHHRHNGHKHPLRSPKSPNSQSHNDEHRNGRRSESSSPDAFIESQRQESIA 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2179g00249 489 FunFam Serine/threonine-protein kinase BIK1 44 159 - -
Gabi2179g00249 489 MobiDBLite consensus disorder prediction 370 489 - -
Gabi2179g00249 489 FunFam Probable serine/threonine-protein kinase PBL8 160 369 - -
Gabi2179g00249 489 MobiDBLite consensus disorder prediction 431 450 - -
Gabi2179g00249 489 MobiDBLite consensus disorder prediction 407 430 - -
Gabi2179g00249 489 ProSitePatterns Serine/Threonine protein kinases active-site signature. 203 215 IPR008271 GO:0004672|GO:0006468
Gabi2179g00249 489 SUPERFAMILY Protein kinase-like (PK-like) 54 355 IPR011009 -
Gabi2179g00249 489 Gene3D Phosphorylase Kinase; domain 1 44 159 - -
Gabi2179g00249 489 MobiDBLite consensus disorder prediction 473 489 - -
Gabi2179g00249 489 Gene3D Transferase(Phosphotransferase) domain 1 160 363 - -
Gabi2179g00249 489 Pfam Protein tyrosine and serine/threonine kinase 81 354 IPR001245 GO:0004672|GO:0006468
Gabi2179g00249 489 MobiDBLite consensus disorder prediction 377 394 - -
Gabi2179g00249 489 CDD STKc_IRAK 83 357 - -
Gabi2179g00249 489 PANTHER OS01G0588500 PROTEIN-RELATED 39 358 - -
Gabi2179g00249 489 ProSiteProfiles Protein kinase domain profile. 77 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2179g00249 489 MobiDBLite consensus disorder prediction 458 472 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2179g00249 Gabi-Chr2179 2289672 2291879 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2179g00249 65 354 Glycoside Hydrolase AT3G07070 53.925 4.05e-101 308
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Gabi2179g00249 PK_Tyr_Ser-Thr 3.9e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2179g00249 - - mtr:25494166 754.977