Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2179g00229 ATGGCGTTAGTCCAATGTTCAGAGAAGCTAGGCTCCCTCATGCTTCAATTAGGCAAAAATTTCGTTATGTTCATGGTGATGGTTATTGCATGCAATGGTTTACATTTCCTACTAAGGCCTTTTTCACAACCTCGCATTACTTCTGACATAATTGTAGGACTAGTTATGGGCAACGTACCTTTTTTACGTGAACTATATGCGGGATTCAACAGGACGTTTGAGTTTATCATTGATTTTGGTATGGTGTGTTACATGTTTGCCTTGGGAATAGAAATGGATCCTTACGTACTATTCAAACGACCAACTAGGGATGTTCACATTGCTTACGCAGCAGTAATATCCACGTTCATGCTAGCCCTTTTCACAACCCCAATTCTCCGCATCTTCTCAGGAAAACATGGAATAGAATTCATCATCTGCTTATGTATTTTCCTTTCTAGCACAGCATCCCCAGTCTTGACCCGTCTAATAACTCACCTCAAAATAGGTAAGTCTGATATTGGGAAGCTTGTCATAGCAGCAGGGATGCACTCAGATTGCTTGTGCATTTTGCTTCTTTCAGTTGGCTACATTTCTATGCCATTGGATACATTTTGCAATGATGTGGAAGTAAAGAACCGTCTTAAGAAGACCATTATAATGGGGTGTGCAGTTATTGGGCAGACATTGTTGGCAGCCATAGTTTCACCAATTTTTATGAATTGGGTTGACAACGAAAACCCAGAAGGAAAACCCATGAAAGGTTCACACCTGGTACTGTCAATTGCCTTCATGACAATGGTTTGTGCCTCCTCAACTCTATATGACTACAGTCCAATTCTAAGTGCGTTTATAACAGGGGTTTGTTTTCCCCGGAATGGAAGAGTTTCCAAATGGGTTATAGGCAAAATCAACTACATGTTGAACATCATCTTCTTTCCCATCTTTTTCTTGTGGATGGGTTATGCAGCTCATTTCAGGGAGTTTGAGGTTGGACAGCTATCAACATGGATGAGATTATTTGTACCCATAGTGGTAGTGACGTTAGGTAAAATTGCTGGAACAGTTATTTCTGGGGCAATGCTTGGCTTTCACTGGCCTGAATCTGTTGCAATCGGATTGCTCCTCTCGGTCAAGGGCCATTTTCATATCTACATAGCTGTCAAATTGATTGGTTGTGGCGTCAGCAGTGTTTCCTCCAGCATTGCTATGCTAATTGCAGTATTTTTCACGGTGGTGCATGGCCCCACAGTTGTGGCAAATATCATCAAACGTGCCAGGAAGAGAGCACCTACTCATCGCATGGCCCTCCAATTGCTCGATCCATTAAGTGAGCTAAGGATACTTCTGTGCGTTCATGGACCTGACAATGTTCCTGCTTCCATCAACTTCATGGAGATCTCAAGGGGGACAGCAGACCCTGGCATTCTTGTATATGTTGCTGAAATGATTGAACTAACTGAACAATTAGCAGCCACAGTAGAGAGGGGTGAGGGAGTACTAGCAACAATTGTGAAAGACAAGAAAGTCATGGAGATGAGAGACCAAGTAACCAGCTCCTTTCAAGCCTATGTAGATGAGGATGGTGATGGTATTACGCTCAAAAGGACATTGGCAGTGTCAACAATCAATAACATGGCAAGGGACATTTGCGTTTTAGCAGAAGACTTGATGATTGCCCTCATCATATTACCATTCCACATGAGCCAGCGTCAGGATGGAAAATTGGATAGTGGCAATCAAGGGTTCAGACATGTGAACCGAAAGGTATTGAGGAGTGCTCCTTGTTCGGTGGGGATTCTAGTGAACAGAGGCTTTGGATCCATTGAAAAGATATCAAGATGTGAGGCATCCGTGAAAGTGGCAGTAATATTCATTGGTGGAAAAGATGATAGAGAAGCACTTGCCTATGCAGGTCTAGTAGCTAGGCATAAAGGAGTAAAACTCACAGTAATAAGATTTCTGGTAGATACAAGTGCAGAATCCTCAAGATTAGCAGCTTATAGGGTAAGCATTCCAGGGCTGGAGGAGGAGATGGGATTGGATGATGAATACTTTGCACAGTTCTATGAAAAGCATATAGTTGGAGGTCGTATTTCCTATACGGAGAAACATCTTGCAAATGCAGCTGAGACCTTCTCCACTCTCAGATCATTTGAAGGTCAATACTCACTGGTCATAGTAGGAAGAGAAGGTGGAGTGAACTCTATATTGACAAGGGGGATGAATGACTGGCAACATTGCCCAGAACTTGGACCAATAGGGGATGTTCTTTCAGGATCAGACTTCTTAATGACAGTCTCTGTGTTGATAATCCAACAACACAAACTCAGAGGAGAATTAGATGGACTTGATGATGACTTCTCTATAATGTAG 2355 0.4251 MALVQCSEKLGSLMLQLGKNFVMFMVMVIACNGLHFLLRPFSQPRITSDIIVGLVMGNVPFLRELYAGFNRTFEFIIDFGMVCYMFALGIEMDPYVLFKRPTRDVHIAYAAVISTFMLALFTTPILRIFSGKHGIEFIICLCIFLSSTASPVLTRLITHLKIGKSDIGKLVIAAGMHSDCLCILLLSVGYISMPLDTFCNDVEVKNRLKKTIIMGCAVIGQTLLAAIVSPIFMNWVDNENPEGKPMKGSHLVLSIAFMTMVCASSTLYDYSPILSAFITGVCFPRNGRVSKWVIGKINYMLNIIFFPIFFLWMGYAAHFREFEVGQLSTWMRLFVPIVVVTLGKIAGTVISGAMLGFHWPESVAIGLLLSVKGHFHIYIAVKLIGCGVSSVSSSIAMLIAVFFTVVHGPTVVANIIKRARKRAPTHRMALQLLDPLSELRILLCVHGPDNVPASINFMEISRGTADPGILVYVAEMIELTEQLAATVERGEGVLATIVKDKKVMEMRDQVTSSFQAYVDEDGDGITLKRTLAVSTINNMARDICVLAEDLMIALIILPFHMSQRQDGKLDSGNQGFRHVNRKVLRSAPCSVGILVNRGFGSIEKISRCEASVKVAVIFIGGKDDREALAYAGLVARHKGVKLTVIRFLVDTSAESSRLAAYRVSIPGLEEEMGLDDEYFAQFYEKHIVGGRISYTEKHLANAAETFSTLRSFEGQYSLVIVGREGGVNSILTRGMNDWQHCPELGPIGDVLSGSDFLMTVSVLIIQQHKLRGELDGLDDDFSIM 784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2179g00229 784 FunFam Cation/H(+) antiporter 28 18 425 - -
Gabi2179g00229 784 Gene3D - 440 738 - -
Gabi2179g00229 784 Pfam Sodium/hydrogen exchanger family 25 411 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Gabi2179g00229 784 PANTHER CATION/H + ANTIPORTER 23 769 - -
Gabi2179g00229 784 Gene3D - 19 425 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2179g00229 Gabi-Chr2179 2149337 2152649 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2179g00229 22 784 Antiporter Super Family AT3G52080 48.906 0.0 778
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2179g00229 K26731 - gmx:100815945 1168.68