Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2179g00212 ATGCTTACGTGCATAGCTCGTCCAAAGAAACCAGGAAACGACTCACTGAGTAAACCTGAAGATGCCGATCCGAACAACGCAACAAACGCTGCTAAAAACCAAGCCGTCAAATCCCTAACTTCTCAGATAAAGGATATGGCGATGAAGGCATCGGGGGCCTACAAGCATTGCGCCCCCTGCACGGGCCCACCGACGCAGGGTCGACCTAATAGCAATACCGAGTCGGACGCTGACTCGGATCGGTTCCGATTGTCGTACCGGAGAACAGGGAGCTCGAGCTCGACGACGACGAGGACATGGGGAAAGGAGATGGAGGCGAGGCTGAAGGGGATTTCGAGCGGGGAGGGAACGCCGAACTCCGCCAGTGGACGGCGGGTGGAGCCGGTGGTGCTGTTCGTGGAAGAGAATGAACCAAAGGAGTGGGTGGCGCAGGTGGAGCCTGGCGTTTTGATTACCTTCGTGTCGTTGCCGCGTGGCGGGAACGATCTCAAGCGCATACGGTTCAGTCGAGAGATGTTCAACAAATGGCAAGCTCAAAGGTGGTGGGCAGAGAACTACGACAGGGTCATGGAACTTTACAATGTTCAAAGGTTTAACCGCCAAGCGTTCCCTCTTCCAACGCCACCTAGGTCTGAGGATGAGAGCACAAAGCTTGAATCAGCAGAAGATAGCCCTGTAACACCTCCACTAAGCAGGGAACGGTTACCCCGTAATATGTACCGACCAACGGGGATGGGAATGGGATACTCATCCTCAGATTCCTTTGATCATCAGTCAATGCAATCCCGGCATTTCTATGACTCGAATGTTATGAACTCAACCCCAAAAGTCTCCACCATTAGTGCGGCCAAGACCGAGATATCATCGATGGACGCTTCTATCAGAAGTAGCTCATCGAGAGACGCTGATCGCTCTGGTGATTTATCAATCAGTAATGCTAGTGATTTGGAGACTGAATGGGTTGAACAGGATGAACCTGGGGTTTACATTACGATCAGAGCGTTGCCAGGTGGCAAAAGGGAGCTCAGACGAGTCAGATTCAGCCGAGAAAAATTTGGGGAGATGCATGCTAGATTATGGTGGGAGGAGAACCGTGCCAGAATACATGAACAATACTTGTGA 1122 0.5196 MLTCIARPKKPGNDSLSKPEDADPNNATNAAKNQAVKSLTSQIKDMAMKASGAYKHCAPCTGPPTQGRPNSNTESDADSDRFRLSYRRTGSSSSTTTRTWGKEMEARLKGISSGEGTPNSASGRRVEPVVLFVEENEPKEWVAQVEPGVLITFVSLPRGGNDLKRIRFSREMFNKWQAQRWWAENYDRVMELYNVQRFNRQAFPLPTPPRSEDESTKLESAEDSPVTPPLSRERLPRNMYRPTGMGMGYSSSDSFDHQSMQSRHFYDSNVMNSTPKVSTISAAKTEISSMDASIRSSSSRDADRSGDLSISNASDLETEWVEQDEPGVYITIRALPGGKRELRRVRFSREKFGEMHARLWWEENRARIHEQYL 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2179g00212 373 Pfam Transcription factor BRX N-terminal domain 28 60 IPR027988 -
Gabi2179g00212 373 ProSiteProfiles BRX domain profile. 139 194 IPR013591 -
Gabi2179g00212 373 MobiDBLite consensus disorder prediction 1 102 - -
Gabi2179g00212 373 MobiDBLite consensus disorder prediction 19 45 - -
Gabi2179g00212 373 ProSiteProfiles BRX domain profile. 318 373 IPR013591 -
Gabi2179g00212 373 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 373 IPR044532 -
Gabi2179g00212 373 MobiDBLite consensus disorder prediction 86 101 - -
Gabi2179g00212 373 Pfam Transcription factor regulating root and shoot growth via Pin3 317 372 IPR013591 -
Gabi2179g00212 373 Pfam Transcription factor regulating root and shoot growth via Pin3 139 193 IPR013591 -
Gabi2179g00212 373 MobiDBLite consensus disorder prediction 203 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2179g00212 Gabi-Chr2179 2017905 2023978 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2179g00212 1 373 Major Intrinsic Protein MIP AT1G31880 44.473 8.03e-93 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2179g00212 - - gmx:100794109 654.825