Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2179g00187 ATGGAGGAAATATCTTCGAGTGTTGCAGTACCATTTGCACTTGGAAATCTGATTCAAAAGGAGTCTGCAGTGGCTACCCACATGGAGATAACTGGGCTAAAGCTTATGGCAAATACAGCAGCAGCTTTAATATTGAATCCTGCAGTGGAGGATTGTCAATCATATTCTGTTGGAAGTGAAAACCATGCAGATGTTAGTCTACAACACCAAATTACAGTATCTGCAGAGGTAAAAGAGAATCAAGTTGGAGCTGCTCTTCTCTCTGAAATGGTTATTGAATATGAGAGTAATTGGGTCTTGACTGAGAGCCATAACAAGGCTAGAAAGGATGATGAATTCATGTTAGCTGTGGATTTTCAGCGTCTGCATAATTCAAGCTCTCAATCTGATACTAATGACAAAAGTGGTCCTTGTGGGGAGGAAGCAGCATCTTTGGAGACTAGTTATTCTGAAATAGATTCACCAATTATCATCAAGATTGATGATAATATCCATGGAAAGTCCGGTTTAAACGAGCCGCATCCAGATCTAAAGCCAGTGCAGAACACAGTTTCTGTTGCAATGGATATTGAGAGTGAGGACCGAAGTGGATCGGATCCAACACTATCATCTTCTGTGCTTCTTGATCAGTTGCTAAAGGAGAATAACACGTGGAGAACAAGCTACCAGAATGCTTTGGAATCGAGTAGTGGCCCTCTATGGGGTTTTTCATCAATTTGTGGAATGAGACAGGAGATGGAAGATGCAATTTCTGTTAAGCCTCAACTTTTTCAAGTCCCTTCACAGATGCTAATGGATGGCCATGTGAATGAAAACACAAAATACTCACCAGCCCACTTTTTTGGTGTCTATGATGGACATGGGGGCTTTCAGGTTGCTAATTGCTGCCGGGAACGTCTTCATTCAGTGTTGATTGAGGAGATAGAAGCTGCACAATCAAGTTTGGCTGAGTCAAATGGGAGAGACAATTGGCAGGACCATTGGAAGAAAGCATTCTCCAATTGTTTTCAGAAAGTAGATGATGAGGTTGGAGGAATTGGTGCAGCTAATAGTGGAAACAACAGTGGGGGATCTGATTCTCATAGTGAACCTCTTGCTCCTGAGACTGCTGGCTCCACTGCAGTGGTTGTCATTTTAAGTCAAACCCACATAATAGTTGCAAATTGTGGGGATTCAAGAGCTGTCTTGTATCGTGGCAAAGAAGCACTGCCATTATCTGCTGACCACAAACCAAATCGAGAGGATGAACGGGAAAGGATAGAGGCTGCAGGAGGAAGAGTCATACATTGGAAAGGATACAGAGTTCTTGGTGTCTTGGCAATGTCAAGGTCCATAGGTGATAGATACTTGAAACCATGGATAATTCCAGAACCAGAAGTCAATATTGTGCAAAGAGAGAAAAACGATGAGTGCCTTATTCTAGCAAGTGATGGTTTATGGGATGTAATGACAAATGAAGAAGCCTGCGATGTTGCACGGAAGCGAATCCTTATTTGGCACAAAAAGTATGGCAACAACGGGTCAACAGGACAAGGTGAAGGAGCTGATCCTGCAGCTCAGTCTGCTGCAGAGTATCTATCTAGACTAGCCCTCCAAAGGGGAAGTCAAGATAACATCTCTGTAATTGTGATAGACTTGAAGGCTCAAAGAAAATTTAAGAAAAAGACATAA 1671 0.4237 MEEISSSVAVPFALGNLIQKESAVATHMEITGLKLMANTAAALILNPAVEDCQSYSVGSENHADVSLQHQITVSAEVKENQVGAALLSEMVIEYESNWVLTESHNKARKDDEFMLAVDFQRLHNSSSQSDTNDKSGPCGEEAASLETSYSEIDSPIIIKIDDNIHGKSGLNEPHPDLKPVQNTVSVAMDIESEDRSGSDPTLSSSVLLDQLLKENNTWRTSYQNALESSSGPLWGFSSICGMRQEMEDAISVKPQLFQVPSQMLMDGHVNENTKYSPAHFFGVYDGHGGFQVANCCRERLHSVLIEEIEAAQSSLAESNGRDNWQDHWKKAFSNCFQKVDDEVGGIGAANSGNNSGGSDSHSEPLAPETAGSTAVVVILSQTHIIVANCGDSRAVLYRGKEALPLSADHKPNREDERERIEAAGGRVIHWKGYRVLGVLAMSRSIGDRYLKPWIIPEPEVNIVQREKNDECLILASDGLWDVMTNEEACDVARKRILIWHKKYGNNGSTGQGEGADPAAQSAAEYLSRLALQRGSQDNISVIVIDLKAQRKFKKKT 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2179g00187 556 SMART PP2C_SIG_2 264 546 IPR001932 -
Gabi2179g00187 556 Pfam Protein phosphatase 2C 236 539 IPR001932 -
Gabi2179g00187 556 ProSitePatterns PPM-type phosphatase domain signature. 280 288 IPR000222 GO:0043169
Gabi2179g00187 556 MobiDBLite consensus disorder prediction 348 367 - -
Gabi2179g00187 556 SMART PP2C_4 223 544 IPR001932 -
Gabi2179g00187 556 MobiDBLite consensus disorder prediction 124 147 - -
Gabi2179g00187 556 Gene3D - 221 556 IPR036457 -
Gabi2179g00187 556 ProSiteProfiles PPM-type phosphatase domain profile. 233 546 IPR001932 -
Gabi2179g00187 556 FunFam Protein phosphatase 2C 16 221 556 - -
Gabi2179g00187 556 PANTHER PROTEIN PHOSPHATASE 198 546 IPR015655 GO:0004722|GO:0006470
Gabi2179g00187 556 SUPERFAMILY PP2C-like 228 547 IPR036457 -
Gabi2179g00187 556 CDD PP2Cc 235 546 IPR001932 -
Gabi2179g00187 556 MobiDBLite consensus disorder prediction 346 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2179g00187 Gabi-Chr2179 1894143 1897564 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2179g00187 168 555 PP2C-type Phosphatase Gene Family AT4G26080 53.671 2.36e-136 401
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2179g00187 K14497 - gmx:100789207 801.586