Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2179g00124 ATGACAGTAGATCTGGTAGGGTTTTCCAAGATCAGGATGGAAGAAGAGATAGCCATACAAGAAGCTGCTTCCGCTGGGTTGAAGAGCATGGAGCATTTAATTCGCGTTCTTTCTTCTCAAGCCCCTTCTTCTTCTTCCTCTTCTTATTCCTCTGTTTCGTCCACACAGAGTAAACTCCACCACCACAACCATCTCCTCAATCTCAATCACCTTGACTGCTCAGAAATCACAGACTTCACCGTCTCTAAGTTCAAGCAGGTTATTAATTTGTTGAATCGCACCGGCCACGCTCGATTTCGTCGCGCACCTTCTCATCCTTCTCCCTCTGTTTCTGTTCCTTGTAAATCTGAAAAATTCAACCCTGTTATTCAAAACCAACCCCAGTCAGTGACTCTTGACTTTGCCAAGCCCGTATTGGTCAAATCCAATCCCAACCCATCTACCGATTTAGCAGTTTCTCAACACTCCAAGTCCAAGGACACCTATAGCATATCCCCTCCCATCTCCACCACCACCTCCTCCTTCATGTCCTCCATCACCGGTGACGGCAGCGTTTCCGACGGCAAGATAGGCCCCTCCATCCTCGCCGCCGCACCTGCCGTTTCCGTCGGCAAGCCTCCCCTGTCCTCATCTCACCGGAAAAGGTGTCACGATGCTACCTTCTCCGCCGGCGCATCCGGAAAAGTCTCATCCTCGGGCCAGTGCCACTGCTCCAAGAGAAGGAAATCCCGTGTGAAACGAACGATCCGAGTGCCGGCGATAAGCTCGAAGATTGCCGATATACCAGCAGACGAGTACTCATGGAGAAAGTACGGTCAAAAACCCATCAAGGGATCACCTTACCCACGTGGGTATTACAAGTGCAGCAGCGTGAGAGGATGTCCAGCGAGGAAGCACGTGGAGCGAGCCCAAGATGATCCTAATATGCTCATCGTCACTTACGAGGGAGAGCACCGTCACTCGCAGGCCCAAACCACGGGAGCCGCCGCCGGTTTTAACTCTCACCCGATTTAA 1014 0.5158 MTVDLVGFSKIRMEEEIAIQEAASAGLKSMEHLIRVLSSQAPSSSSSSYSSVSSTQSKLHHHNHLLNLNHLDCSEITDFTVSKFKQVINLLNRTGHARFRRAPSHPSPSVSVPCKSEKFNPVIQNQPQSVTLDFAKPVLVKSNPNPSTDLAVSQHSKSKDTYSISPPISTTTSSFMSSITGDGSVSDGKIGPSILAAAPAVSVGKPPLSSSHRKRCHDATFSAGASGKVSSSGQCHCSKRRKSRVKRTIRVPAISSKIADIPADEYSWRKYGQKPIKGSPYPRGYYKCSSVRGCPARKHVERAQDDPNMLIVTYEGEHRHSQAQTTGAAAGFNSHPI 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2179g00124 337 ProSiteProfiles WRKY domain profile. 257 323 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi2179g00124 337 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 16 325 IPR044810 GO:0003700
Gabi2179g00124 337 Pfam Plant zinc cluster domain 213 260 IPR018872 -
Gabi2179g00124 337 SUPERFAMILY WRKY DNA-binding domain 260 322 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi2179g00124 337 Pfam WRKY DNA -binding domain 264 320 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi2179g00124 337 SMART WRKY_cls 262 322 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi2179g00124 337 MobiDBLite consensus disorder prediction 318 337 - -
Gabi2179g00124 337 Gene3D WRKY domain 235 323 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi2179g00124 337 MobiDBLite consensus disorder prediction 145 165 - -
Gabi2179g00124 337 FunFam WRKY transcription factor 65 246 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2179g00124 Gabi-Chr2179 1394677 1396430 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2179g00124 1 323 WRKY Transcription Factor Family AT2G24570 52.738 2.55e-101 299
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gabi2179g00124 WRKY 2.7e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2179g00124 - - gmx:732587 441.039